diff --git a/README.md b/README.md index 14cadbe..0fbc6cd 100644 --- a/README.md +++ b/README.md @@ -1,23 +1,31 @@ # TOPIC 8 + Develop an R-based software, which will perform the following tasks: -1. Download from the OpenSky Network online database the observations of the trajectory of a randomly selected aircraft on a randomly selected flight over at least five days, in uninterrupted continuity, perform the selections in the graphical user interface (GUI) of your R script, -2. determine the characteristics of each trajectory according to the parameters: diffusion distance, straightness, duration of travel, mean travel velocity and fractal dimension, using the R library trajr, (4) perform basic statistical analysis of the parameters of daily trajectories from -3. arithmetic mean, variance, quartiles, boxplot, estimate of the density -function of the experimental statistical distribution, analyze and interpret them. -4. Demonstrate the -application of the developed software support on a selected example of use. In the final project report, -describe the problem, describe the method and the developed software support in the R environment, -present and interpret the results, and form a conclusion. + +1. download from the OpenSky Network online database the observations of the trajectory of a randomly selected aircraft on a randomly selected flight over at least five days, in uninterrupted continuity (1) + +2. perform the selections in the graphical user interface (GUI) of your R script, + +3. determine the characteristics of each trajectory according to the parameters: diffusion distance, straightness, duration of travel, mean travel velocity and fractal dimension (2), + +4. using the R library trajr, (4) perform basic statistical analysis of the parameters of daily trajectories from (3): arithmetic mean, variance, quartiles, boxplot, estimate of the density function of the experimental statistical distribution, analyze and interpret them. + +5. Demonstrate the application of the developed software support on a selected example of use. + +6. In the final project report, describe the problem, describe the method and the developed software support in the R environment, present and interpret the results, and form a conclusion. ## Resources -1. [The OpenSky Network. (2025). Internet archive of observed aircraft trajectories.](https://opensky-network.org/datasets/states/) -2. [Schäfer, M, Strohmeier, M, Lenders, V, Martinovic, I, Wilhelm, M. (2014). Bringing Up OpenSky: A Large-scale ADS-B Sensor Network for Research. In Proceedings of the 13th IEEE/ACM International Symposium on Information Processing in Sensor Networks (IPSN), pages 83-94.](https://opensky-network.org/files/publications/ipsn2014.pdf) -3. [Zheng, Y. (2015). Trajectory Data Mining: An Overview. ACM Transactions on Intelligent Systems and Technology, 61(3), 1–41.](https://doi.org/10.1145/2743025) -4. [Thulin, M. (2025). Modern Statistics with R: From wrangling and exploring data to inference and predictive modelling. CRC Press. Boca Raton, Fl.](https://modernstatisticswithr.com/) -5. [McLean, D J, and Skowron Volponi, M A. (2018). trajr: An R package for characterisation of animal trajectories. Ethology, 124, 440–448.](https://doi.org/10.1111/eth.12739) + +1. [The OpenSky Network. (2025). Internet archive of observed aircraft trajectories.](https://opensky-network.org/datasets/states/) +2. [Schäfer, M, Strohmeier, M, Lenders, V, Martinovic, I, Wilhelm, M. (2014). Bringing Up OpenSky: A Large-scale ADS-B Sensor Network for Research. In Proceedings of the 13th IEEE/ACM International Symposium on Information Processing in Sensor Networks (IPSN), pages 83-94.](https://opensky-network.org/files/publications/ipsn2014.pdf) +3. [Zheng, Y. (2015). Trajectory Data Mining: An Overview. ACM Transactions on Intelligent Systems and Technology, 61(3), 1–41.](https://doi.org/10.1145/2743025) +4. [Thulin, M. (2025). Modern Statistics with R: From wrangling and exploring data to inference and predictive modelling. CRC Press. Boca Raton, Fl.](https://modernstatisticswithr.com/) +5. [McLean, D J, and Skowron Volponi, M A. (2018). trajr: An R package for characterisation of animal trajectories. Ethology, 124, 440–448.](https://doi.org/10.1111/eth.12739) ## Setup + Use [renv](https://rstudio.github.io/renv/articles/renv.html) to install the correct dependencies using -```R + +``` r renv::restore() ``` diff --git a/main.Rmd b/main.Rmd new file mode 100644 index 0000000..e1fdc57 --- /dev/null +++ b/main.Rmd @@ -0,0 +1,15 @@ +--- +title: "Topic 8" +output: html_document +date: "`r Sys.Date()`" +--- + +```{r setup, include=FALSE} +knitr::opts_chunk$set(echo = TRUE) +``` + +# Download data +from OpenSky https://opensky-network.org/datasets/states/#flights/ +```{r download} +library(openSkies) +``` \ No newline at end of file diff --git a/renv.lock b/renv.lock index 8239b9a..d8b03af 100644 --- a/renv.lock +++ b/renv.lock @@ -1,6 +1,6 @@ { "R": { - "Version": "4.5.1", + "Version": "4.5.2", "Repositories": [ { "Name": "CRAN", @@ -58,155 +58,6 @@ "Maintainer": "Kirill Müller ", "Repository": "CRAN" }, - "DataExplorer": { - "Package": "DataExplorer", - "Version": "0.8.4", - "Source": "Repository", - "Title": "Automate Data Exploration and Treatment", - "Authors@R": "person(\"Boxuan\", \"Cui\", email = \"boxuancui@gmail.com\", role = c(\"aut\", \"cre\"))", - "Description": "Automated data exploration process for analytic tasks and predictive modeling, so that users could focus on understanding data and extracting insights. The package scans and analyzes each variable, and visualizes them with typical graphical techniques. Common data processing methods are also available to treat and format data.", - "Depends": [ - "R (>= 3.6)" - ], - "Imports": [ - "data.table (>= 1.13.4)", - "reshape2 (>= 1.4.3)", - "scales (>= 1.1.0)", - "ggplot2", - "gridExtra", - "rmarkdown (>= 2.5)", - "networkD3 (>= 0.4)", - "stats", - "utils", - "tools", - "parallel" - ], - "Suggests": [ - "testthat", - "covr", - "knitr", - "jsonlite", - "nycflights13" - ], - "SystemRequirements": "pandoc (>= 1.12.3) - http://pandoc.org", - "License": "MIT + file LICENSE", - "Language": "en-US", - "URL": "http://boxuancui.github.io/DataExplorer/", - "BugReports": "https://github.com/boxuancui/DataExplorer/issues", - "RoxygenNote": "7.3.2", - "Encoding": "UTF-8", - "VignetteBuilder": "knitr", - "NeedsCompilation": "no", - "Author": "Boxuan Cui [aut, cre]", - "Maintainer": "Boxuan Cui ", - "Repository": "CRAN" - }, - "KernSmooth": { - "Package": "KernSmooth", - "Version": "2.23-26", - "Source": "Repository", - "Priority": "recommended", - "Date": "2024-12-10", - "Title": "Functions for Kernel Smoothing Supporting Wand & Jones (1995)", - "Authors@R": "c(person(\"Matt\", \"Wand\", role = \"aut\", email = \"Matt.Wand@uts.edu.au\"), person(\"Cleve\", \"Moler\", role = \"ctb\", comment = \"LINPACK routines in src/d*\"), person(\"Brian\", \"Ripley\", role = c(\"trl\", \"cre\", \"ctb\"), email = \"Brian.Ripley@R-project.org\", comment = \"R port and updates\"))", - "Note": "Maintainers are not available to give advice on using a package they did not author.", - "Depends": [ - "R (>= 2.5.0)", - "stats" - ], - "Suggests": [ - "MASS", - "carData" - ], - "Description": "Functions for kernel smoothing (and density estimation) corresponding to the book: Wand, M.P. and Jones, M.C. (1995) \"Kernel Smoothing\".", - "License": "Unlimited", - "ByteCompile": "yes", - "NeedsCompilation": "yes", - "Author": "Matt Wand [aut], Cleve Moler [ctb] (LINPACK routines in src/d*), Brian Ripley [trl, cre, ctb] (R port and updates)", - "Maintainer": "Brian Ripley ", - "Repository": "CRAN" - }, - "MASS": { - "Package": "MASS", - "Version": "7.3-65", - "Source": "Repository", - "Priority": "recommended", - "Date": "2025-02-19", - "Revision": "$Rev: 3681 $", - "Depends": [ - "R (>= 4.4.0)", - "grDevices", - "graphics", - "stats", - "utils" - ], - "Imports": [ - "methods" - ], - "Suggests": [ - "lattice", - "nlme", - "nnet", - "survival" - ], - "Authors@R": "c(person(\"Brian\", \"Ripley\", role = c(\"aut\", \"cre\", \"cph\"), email = \"Brian.Ripley@R-project.org\"), person(\"Bill\", \"Venables\", role = c(\"aut\", \"cph\")), person(c(\"Douglas\", \"M.\"), \"Bates\", role = \"ctb\"), person(\"Kurt\", \"Hornik\", role = \"trl\", comment = \"partial port ca 1998\"), person(\"Albrecht\", \"Gebhardt\", role = \"trl\", comment = \"partial port ca 1998\"), person(\"David\", \"Firth\", role = \"ctb\", comment = \"support functions for polr\"))", - "Description": "Functions and datasets to support Venables and Ripley, \"Modern Applied Statistics with S\" (4th edition, 2002).", - "Title": "Support Functions and Datasets for Venables and Ripley's MASS", - "LazyData": "yes", - "ByteCompile": "yes", - "License": "GPL-2 | GPL-3", - "URL": "http://www.stats.ox.ac.uk/pub/MASS4/", - "Contact": "", - "NeedsCompilation": "yes", - "Author": "Brian Ripley [aut, cre, cph], Bill Venables [aut, cph], Douglas M. Bates [ctb], Kurt Hornik [trl] (partial port ca 1998), Albrecht Gebhardt [trl] (partial port ca 1998), David Firth [ctb] (support functions for polr)", - "Maintainer": "Brian Ripley ", - "Repository": "CRAN" - }, - "Matrix": { - "Package": "Matrix", - "Version": "1.7-3", - "Source": "Repository", - "VersionNote": "do also bump src/version.h, inst/include/Matrix/version.h", - "Date": "2025-03-05", - "Priority": "recommended", - "Title": "Sparse and Dense Matrix Classes and Methods", - "Description": "A rich hierarchy of sparse and dense matrix classes, including general, symmetric, triangular, and diagonal matrices with numeric, logical, or pattern entries. Efficient methods for operating on such matrices, often wrapping the 'BLAS', 'LAPACK', and 'SuiteSparse' libraries.", - "License": "GPL (>= 2) | file LICENCE", - "URL": "https://Matrix.R-forge.R-project.org", - "BugReports": "https://R-forge.R-project.org/tracker/?atid=294&group_id=61", - "Contact": "Matrix-authors@R-project.org", - "Authors@R": "c(person(\"Douglas\", \"Bates\", role = \"aut\", comment = c(ORCID = \"0000-0001-8316-9503\")), person(\"Martin\", \"Maechler\", role = c(\"aut\", \"cre\"), email = \"mmaechler+Matrix@gmail.com\", comment = c(ORCID = \"0000-0002-8685-9910\")), person(\"Mikael\", \"Jagan\", role = \"aut\", comment = c(ORCID = \"0000-0002-3542-2938\")), person(\"Timothy A.\", \"Davis\", role = \"ctb\", comment = c(ORCID = \"0000-0001-7614-6899\", \"SuiteSparse libraries\", \"collaborators listed in dir(system.file(\\\"doc\\\", \\\"SuiteSparse\\\", package=\\\"Matrix\\\"), pattern=\\\"License\\\", full.names=TRUE, recursive=TRUE)\")), person(\"George\", \"Karypis\", role = \"ctb\", comment = c(ORCID = \"0000-0003-2753-1437\", \"METIS library\", \"Copyright: Regents of the University of Minnesota\")), person(\"Jason\", \"Riedy\", role = \"ctb\", comment = c(ORCID = \"0000-0002-4345-4200\", \"GNU Octave's condest() and onenormest()\", \"Copyright: Regents of the University of California\")), person(\"Jens\", \"Oehlschlägel\", role = \"ctb\", comment = \"initial nearPD()\"), person(\"R Core Team\", role = \"ctb\", comment = c(ROR = \"02zz1nj61\", \"base R's matrix implementation\")))", - "Depends": [ - "R (>= 4.4)", - "methods" - ], - "Imports": [ - "grDevices", - "graphics", - "grid", - "lattice", - "stats", - "utils" - ], - "Suggests": [ - "MASS", - "datasets", - "sfsmisc", - "tools" - ], - "Enhances": [ - "SparseM", - "graph" - ], - "LazyData": "no", - "LazyDataNote": "not possible, since we use data/*.R and our S4 classes", - "BuildResaveData": "no", - "Encoding": "UTF-8", - "NeedsCompilation": "yes", - "Author": "Douglas Bates [aut] (), Martin Maechler [aut, cre] (), Mikael Jagan [aut] (), Timothy A. Davis [ctb] (, SuiteSparse libraries, collaborators listed in dir(system.file(\"doc\", \"SuiteSparse\", package=\"Matrix\"), pattern=\"License\", full.names=TRUE, recursive=TRUE)), George Karypis [ctb] (, METIS library, Copyright: Regents of the University of Minnesota), Jason Riedy [ctb] (, GNU Octave's condest() and onenormest(), Copyright: Regents of the University of California), Jens Oehlschlägel [ctb] (initial nearPD()), R Core Team [ctb] (02zz1nj61, base R's matrix implementation)", - "Maintainer": "Martin Maechler ", - "Repository": "CRAN" - }, "R6": { "Package": "R6", "Version": "2.6.1", @@ -251,6 +102,58 @@ "Repository": "CRAN", "Encoding": "UTF-8" }, + "RPresto": { + "Package": "RPresto", + "Version": "1.4.8", + "Source": "Repository", + "Title": "DBI Connector to Presto", + "Authors@R": "c( person('Onur Ismail', 'Filiz', , 'onur@fb.com', role='aut'), person('Sergey', 'Goder', , 'sgoder@fb.com', role='aut'), person('Jarod G.R.', 'Meng', , 'jarodm@fb.com', role=c('aut', 'cre')), person('Thomas J.', 'Leeper', , 'thomasleeper@fb.com', role='ctb'), person('John Myles', 'White', , 'johnmyleswhite@fb.com', role='ctb') )", + "Copyright": "Meta Platforms, Inc. 2015-present.", + "Description": "Implements a 'DBI' compliant interface to Presto. Presto is an open source distributed SQL query engine for running interactive analytic queries against data sources of all sizes ranging from gigabytes to petabytes: .", + "Depends": [ + "R (>= 3.1.0)", + "methods" + ], + "Imports": [ + "DBI (>= 0.3.0)", + "httr (>= 0.6)", + "openssl", + "jsonlite", + "stringi", + "stats", + "utils", + "purrr", + "dplyr (>= 0.7.0)", + "dbplyr (>= 2.3.3)", + "tibble", + "tidyselect", + "bit64", + "rlang", + "lifecycle", + "lubridate", + "progress", + "vctrs", + "stringdist" + ], + "Suggests": [ + "testthat", + "hms", + "knitr", + "rmarkdown", + "withr" + ], + "License": "BSD_3_clause + file LICENSE", + "URL": "https://github.com/prestodb/RPresto", + "BugReports": "https://github.com/prestodb/RPresto/issues", + "Encoding": "UTF-8", + "Collate": "'PrestoDriver.R' 'Presto.R' 'PrestoSession.R' 'PrestoConnection.R' 'PrestoQuery.R' 'PrestoResult.R' 'RPresto-package.R' 'chunk.R' 'create.dummy.tables.R' 'cte.R' 'dbAppendTable.R' 'dbAppendTableAs.R' 'dbClearResult.R' 'dbColumnType.R' 'dbColumnInfo.R' 'dbConnect.R' 'dbCreateTable.R' 'dbCreateTableAs.R' 'dbDataType.R' 'dbDisconnect.R' 'dbExistsTable.R' 'dbFetch.R' 'dbGetInfo.R' 'dbGetQuery.R' 'dbGetRowCount.R' 'dbGetRowsAffected.R' 'dbGetStatement.R' 'dbHasCompleted.R' 'dbIsValid.R' 'dbListFields.R' 'dbListTables.R' 'dbQuoteIdentifier.R' 'dbQuoteLiteral.R' 'dbReadTable.R' 'dbRemoveTable.R' 'dbRenameTable.R' 'dbSendQuery.R' 'dbUnloadDriver.R' 'dbWriteTable.R' 'dbplyr-db.R' 'dbplyr-sql.R' 'dbplyr-src.R' 'default.R' 'fetch.R' 'presto.field.R' 'presto.field_utilities.R' 'presto_type.R' 'presto_unnest.R' 'request_headers.R' 'sqlAppendTableAs.R' 'sqlCreateTable.R' 'sqlCreateTableAs.R' 'zzz.R'", + "RoxygenNote": "7.3.2", + "VignetteBuilder": "knitr", + "NeedsCompilation": "no", + "Author": "Onur Ismail Filiz [aut], Sergey Goder [aut], Jarod G.R. Meng [aut, cre], Thomas J. Leeper [ctb], John Myles White [ctb]", + "Maintainer": "Jarod G.R. Meng ", + "Repository": "CRAN" + }, "Rcpp": { "Package": "Rcpp", "Version": "1.1.0", @@ -282,7 +185,7 @@ }, "S7": { "Package": "S7", - "Version": "0.2.0", + "Version": "0.2.1", "Source": "Repository", "Title": "An Object Oriented System Meant to Become a Successor to S3 and S4", "Authors@R": "c( person(\"Object-Oriented Programming Working Group\", role = \"cph\"), person(\"Davis\", \"Vaughan\", role = \"aut\"), person(\"Jim\", \"Hester\", role = \"aut\", comment = c(ORCID = \"0000-0002-2739-7082\")), person(\"Tomasz\", \"Kalinowski\", role = \"aut\"), person(\"Will\", \"Landau\", role = \"aut\"), person(\"Michael\", \"Lawrence\", role = \"aut\"), person(\"Martin\", \"Maechler\", role = \"aut\", comment = c(ORCID = \"0000-0002-8685-9910\")), person(\"Luke\", \"Tierney\", role = \"aut\"), person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-4757-117X\")) )", @@ -313,12 +216,37 @@ "Config/testthat/parallel": "TRUE", "Config/testthat/start-first": "external-generic", "Encoding": "UTF-8", - "RoxygenNote": "7.3.2", + "RoxygenNote": "7.3.3", "NeedsCompilation": "yes", - "Author": "Object-Oriented Programming Working Group [cph], Davis Vaughan [aut], Jim Hester [aut] (), Tomasz Kalinowski [aut], Will Landau [aut], Michael Lawrence [aut], Martin Maechler [aut] (), Luke Tierney [aut], Hadley Wickham [aut, cre] ()", + "Author": "Object-Oriented Programming Working Group [cph], Davis Vaughan [aut], Jim Hester [aut] (ORCID: ), Tomasz Kalinowski [aut], Will Landau [aut], Michael Lawrence [aut], Martin Maechler [aut] (ORCID: ), Luke Tierney [aut], Hadley Wickham [aut, cre] (ORCID: )", "Maintainer": "Hadley Wickham ", "Repository": "CRAN" }, + "askpass": { + "Package": "askpass", + "Version": "1.2.1", + "Source": "Repository", + "Type": "Package", + "Title": "Password Entry Utilities for R, Git, and SSH", + "Authors@R": "person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroenooms@gmail.com\", comment = c(ORCID = \"0000-0002-4035-0289\"))", + "Description": "Cross-platform utilities for prompting the user for credentials or a passphrase, for example to authenticate with a server or read a protected key. Includes native programs for MacOS and Windows, hence no 'tcltk' is required. Password entry can be invoked in two different ways: directly from R via the askpass() function, or indirectly as password-entry back-end for 'ssh-agent' or 'git-credential' via the SSH_ASKPASS and GIT_ASKPASS environment variables. Thereby the user can be prompted for credentials or a passphrase if needed when R calls out to git or ssh.", + "License": "MIT + file LICENSE", + "URL": "https://r-lib.r-universe.dev/askpass", + "BugReports": "https://github.com/r-lib/askpass/issues", + "Encoding": "UTF-8", + "Imports": [ + "sys (>= 2.1)" + ], + "RoxygenNote": "7.2.3", + "Suggests": [ + "testthat" + ], + "Language": "en-US", + "NeedsCompilation": "yes", + "Author": "Jeroen Ooms [aut, cre] ()", + "Maintainer": "Jeroen Ooms ", + "Repository": "CRAN" + }, "base64enc": { "Package": "base64enc", "Version": "0.1-3", @@ -336,7 +264,8 @@ "License": "GPL-2 | GPL-3", "URL": "http://www.rforge.net/base64enc", "NeedsCompilation": "yes", - "Repository": "CRAN" + "Repository": "CRAN", + "Encoding": "UTF-8" }, "bit": { "Package": "bit", @@ -405,6 +334,54 @@ "Maintainer": "Michael Chirico ", "Repository": "CRAN" }, + "bitops": { + "Package": "bitops", + "Version": "1.0-9", + "Source": "Repository", + "Date": "2024-10-03", + "Authors@R": "c( person(\"Steve\", \"Dutky\", role = \"aut\", email = \"sdutky@terpalum.umd.edu\", comment = \"S original; then (after MM's port) revised and modified\"), person(\"Martin\", \"Maechler\", role = c(\"cre\", \"aut\"), email = \"maechler@stat.math.ethz.ch\", comment = c(\"Initial R port; tweaks\", ORCID = \"0000-0002-8685-9910\")))", + "Title": "Bitwise Operations", + "Description": "Functions for bitwise operations on integer vectors.", + "License": "GPL (>= 2)", + "URL": "https://github.com/mmaechler/R-bitops", + "BugReports": "https://github.com/mmaechler/R-bitops/issues", + "NeedsCompilation": "yes", + "Author": "Steve Dutky [aut] (S original; then (after MM's port) revised and modified), Martin Maechler [cre, aut] (Initial R port; tweaks, )", + "Maintainer": "Martin Maechler ", + "Repository": "CRAN", + "Encoding": "UTF-8" + }, + "blob": { + "Package": "blob", + "Version": "1.2.4", + "Source": "Repository", + "Title": "A Simple S3 Class for Representing Vectors of Binary Data ('BLOBS')", + "Authors@R": "c( person(\"Hadley\", \"Wickham\", role = \"aut\"), person(\"Kirill\", \"Müller\", , \"kirill@cynkra.com\", role = \"cre\"), person(\"RStudio\", role = c(\"cph\", \"fnd\")) )", + "Description": "R's raw vector is useful for storing a single binary object. What if you want to put a vector of them in a data frame? The 'blob' package provides the blob object, a list of raw vectors, suitable for use as a column in data frame.", + "License": "MIT + file LICENSE", + "URL": "https://blob.tidyverse.org, https://github.com/tidyverse/blob", + "BugReports": "https://github.com/tidyverse/blob/issues", + "Imports": [ + "methods", + "rlang", + "vctrs (>= 0.2.1)" + ], + "Suggests": [ + "covr", + "crayon", + "pillar (>= 1.2.1)", + "testthat" + ], + "Config/autostyle/scope": "line_breaks", + "Config/autostyle/strict": "false", + "Config/Needs/website": "tidyverse/tidytemplate", + "Encoding": "UTF-8", + "RoxygenNote": "7.2.3", + "NeedsCompilation": "no", + "Author": "Hadley Wickham [aut], Kirill Müller [cre], RStudio [cph, fnd]", + "Maintainer": "Kirill Müller ", + "Repository": "CRAN" + }, "bslib": { "Package": "bslib", "Version": "0.9.0", @@ -490,68 +467,6 @@ "Maintainer": "Winston Chang ", "Repository": "CRAN" }, - "class": { - "Package": "class", - "Version": "7.3-23", - "Source": "Repository", - "Priority": "recommended", - "Date": "2025-01-01", - "Depends": [ - "R (>= 3.0.0)", - "stats", - "utils" - ], - "Imports": [ - "MASS" - ], - "Authors@R": "c(person(\"Brian\", \"Ripley\", role = c(\"aut\", \"cre\", \"cph\"), email = \"Brian.Ripley@R-project.org\"), person(\"William\", \"Venables\", role = \"cph\"))", - "Description": "Various functions for classification, including k-nearest neighbour, Learning Vector Quantization and Self-Organizing Maps.", - "Title": "Functions for Classification", - "ByteCompile": "yes", - "License": "GPL-2 | GPL-3", - "URL": "http://www.stats.ox.ac.uk/pub/MASS4/", - "NeedsCompilation": "yes", - "Author": "Brian Ripley [aut, cre, cph], William Venables [cph]", - "Maintainer": "Brian Ripley ", - "Repository": "CRAN" - }, - "classInt": { - "Package": "classInt", - "Version": "0.4-11", - "Source": "Repository", - "Date": "2025-01-06", - "Title": "Choose Univariate Class Intervals", - "Authors@R": "c( person(\"Roger\", \"Bivand\", role=c(\"aut\", \"cre\"), email=\"Roger.Bivand@nhh.no\", comment=c(ORCID=\"0000-0003-2392-6140\")), person(\"Bill\", \"Denney\", role=\"ctb\", comment=c(ORCID=\"0000-0002-5759-428X\")), person(\"Richard\", \"Dunlap\", role=\"ctb\"), person(\"Diego\", \"Hernangómez\", role=\"ctb\", comment=c(ORCID=\"0000-0001-8457-4658\")), person(\"Hisaji\", \"Ono\", role=\"ctb\"), person(\"Josiah\", \"Parry\", role = \"ctb\", comment = c(ORCID = \"0000-0001-9910-865X\")), person(\"Matthieu\", \"Stigler\", role=\"ctb\", comment =c(ORCID=\"0000-0002-6802-4290\")))", - "Depends": [ - "R (>= 2.2)" - ], - "Imports": [ - "grDevices", - "stats", - "graphics", - "e1071", - "class", - "KernSmooth" - ], - "Suggests": [ - "spData (>= 0.2.6.2)", - "units", - "knitr", - "rmarkdown", - "tinytest" - ], - "NeedsCompilation": "yes", - "Description": "Selected commonly used methods for choosing univariate class intervals for mapping or other graphics purposes.", - "License": "GPL (>= 2)", - "URL": "https://r-spatial.github.io/classInt/, https://github.com/r-spatial/classInt/", - "BugReports": "https://github.com/r-spatial/classInt/issues/", - "RoxygenNote": "6.1.1", - "Encoding": "UTF-8", - "VignetteBuilder": "knitr", - "Author": "Roger Bivand [aut, cre] (), Bill Denney [ctb] (), Richard Dunlap [ctb], Diego Hernangómez [ctb] (), Hisaji Ono [ctb], Josiah Parry [ctb] (), Matthieu Stigler [ctb] ()", - "Maintainer": "Roger Bivand ", - "Repository": "CRAN" - }, "cli": { "Package": "cli", "Version": "3.6.5", @@ -599,35 +514,46 @@ "Maintainer": "Gábor Csárdi ", "Repository": "CRAN" }, - "clipr": { - "Package": "clipr", - "Version": "0.8.0", + "cluster": { + "Package": "cluster", + "Version": "2.1.8.1", "Source": "Repository", - "Type": "Package", - "Title": "Read and Write from the System Clipboard", - "Authors@R": "c( person(\"Matthew\", \"Lincoln\", , \"matthew.d.lincoln@gmail.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-4387-3384\")), person(\"Louis\", \"Maddox\", role = \"ctb\"), person(\"Steve\", \"Simpson\", role = \"ctb\"), person(\"Jennifer\", \"Bryan\", role = \"ctb\") )", - "Description": "Simple utility functions to read from and write to the Windows, OS X, and X11 clipboards.", - "License": "GPL-3", - "URL": "https://github.com/mdlincoln/clipr, http://matthewlincoln.net/clipr/", - "BugReports": "https://github.com/mdlincoln/clipr/issues", + "VersionNote": "Last CRAN: 2.1.8 on 2024-12-10; 2.1.7 on 2024-12-06; 2.1.6 on 2023-11-30; 2.1.5 on 2023-11-27", + "Date": "2025-03-11", + "Priority": "recommended", + "Title": "\"Finding Groups in Data\": Cluster Analysis Extended Rousseeuw et al.", + "Description": "Methods for Cluster analysis. Much extended the original from Peter Rousseeuw, Anja Struyf and Mia Hubert, based on Kaufman and Rousseeuw (1990) \"Finding Groups in Data\".", + "Maintainer": "Martin Maechler ", + "Authors@R": "c(person(\"Martin\",\"Maechler\", role = c(\"aut\",\"cre\"), email=\"maechler@stat.math.ethz.ch\", comment = c(ORCID = \"0000-0002-8685-9910\")) ,person(\"Peter\", \"Rousseeuw\", role=\"aut\", email=\"peter.rousseeuw@kuleuven.be\", comment = c(\"Fortran original\", ORCID = \"0000-0002-3807-5353\")) ,person(\"Anja\", \"Struyf\", role=\"aut\", comment= \"S original\") ,person(\"Mia\", \"Hubert\", role=\"aut\", email= \"Mia.Hubert@uia.ua.ac.be\", comment = c(\"S original\", ORCID = \"0000-0001-6398-4850\")) ,person(\"Kurt\", \"Hornik\", role=c(\"trl\", \"ctb\"), email=\"Kurt.Hornik@R-project.org\", comment=c(\"port to R; maintenance(1999-2000)\", ORCID=\"0000-0003-4198-9911\")) ,person(\"Matthias\", \"Studer\", role=\"ctb\") ,person(\"Pierre\", \"Roudier\", role=\"ctb\") ,person(\"Juan\", \"Gonzalez\", role=\"ctb\") ,person(\"Kamil\", \"Kozlowski\", role=\"ctb\") ,person(\"Erich\", \"Schubert\", role=\"ctb\", comment = c(\"fastpam options for pam()\", ORCID = \"0000-0001-9143-4880\")) ,person(\"Keefe\", \"Murphy\", role=\"ctb\", comment = \"volume.ellipsoid({d >= 3})\") #not yet ,person(\"Fischer-Rasmussen\", \"Kasper\", role = \"ctb\", comment = \"Gower distance for CLARA\") )", + "Depends": [ + "R (>= 3.5.0)" + ], "Imports": [ + "graphics", + "grDevices", + "stats", "utils" ], "Suggests": [ - "covr", - "knitr", - "rmarkdown", - "rstudioapi (>= 0.5)", - "testthat (>= 2.0.0)" + "MASS", + "Matrix" ], - "VignetteBuilder": "knitr", - "Encoding": "UTF-8", - "Language": "en-US", - "RoxygenNote": "7.1.2", - "SystemRequirements": "xclip (https://github.com/astrand/xclip) or xsel (http://www.vergenet.net/~conrad/software/xsel/) for accessing the X11 clipboard, or wl-clipboard (https://github.com/bugaevc/wl-clipboard) for systems using Wayland.", - "NeedsCompilation": "no", - "Author": "Matthew Lincoln [aut, cre] (), Louis Maddox [ctb], Steve Simpson [ctb], Jennifer Bryan [ctb]", - "Maintainer": "Matthew Lincoln ", + "SuggestsNote": "MASS: two examples using cov.rob() and mvrnorm(); Matrix tools for testing", + "Enhances": [ + "mvoutlier", + "fpc", + "ellipse", + "sfsmisc" + ], + "EnhancesNote": "xref-ed in man/*.Rd", + "LazyLoad": "yes", + "LazyData": "yes", + "ByteCompile": "yes", + "BuildResaveData": "no", + "License": "GPL (>= 2)", + "URL": "https://svn.r-project.org/R-packages/trunk/cluster/", + "NeedsCompilation": "yes", + "Author": "Martin Maechler [aut, cre] (), Peter Rousseeuw [aut] (Fortran original, ), Anja Struyf [aut] (S original), Mia Hubert [aut] (S original, ), Kurt Hornik [trl, ctb] (port to R; maintenance(1999-2000), ), Matthias Studer [ctb], Pierre Roudier [ctb], Juan Gonzalez [ctb], Kamil Kozlowski [ctb], Erich Schubert [ctb] (fastpam options for pam(), ), Keefe Murphy [ctb] (volume.ellipsoid({d >= 3}))", "Repository": "CRAN" }, "cpp11": { @@ -707,133 +633,186 @@ "Maintainer": "Gábor Csárdi ", "Repository": "CRAN" }, - "crosstalk": { - "Package": "crosstalk", - "Version": "1.2.2", + "credentials": { + "Package": "credentials", + "Version": "2.0.3", "Source": "Repository", "Type": "Package", - "Title": "Inter-Widget Interactivity for HTML Widgets", - "Authors@R": "c( person(\"Joe\", \"Cheng\", , \"joe@posit.co\", role = \"aut\"), person(\"Carson\", \"Sievert\", , \"carson@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-4958-2844\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")), person(, \"jQuery Foundation\", role = \"cph\", comment = \"jQuery library and jQuery UI library\"), person(, \"jQuery contributors\", role = c(\"ctb\", \"cph\"), comment = \"jQuery library; authors listed in inst/www/shared/jquery-AUTHORS.txt\"), person(\"Mark\", \"Otto\", role = \"ctb\", comment = \"Bootstrap library\"), person(\"Jacob\", \"Thornton\", role = \"ctb\", comment = \"Bootstrap library\"), person(, \"Bootstrap contributors\", role = \"ctb\", comment = \"Bootstrap library\"), person(, \"Twitter, Inc\", role = \"cph\", comment = \"Bootstrap library\"), person(\"Brian\", \"Reavis\", role = c(\"ctb\", \"cph\"), comment = \"selectize.js library\"), person(\"Kristopher Michael\", \"Kowal\", role = c(\"ctb\", \"cph\"), comment = \"es5-shim library\"), person(, \"es5-shim contributors\", role = c(\"ctb\", \"cph\"), comment = \"es5-shim library\"), person(\"Denis\", \"Ineshin\", role = c(\"ctb\", \"cph\"), comment = \"ion.rangeSlider library\"), person(\"Sami\", \"Samhuri\", role = c(\"ctb\", \"cph\"), comment = \"Javascript strftime library\") )", - "Description": "Provides building blocks for allowing HTML widgets to communicate with each other, with Shiny or without (i.e. static .html files). Currently supports linked brushing and filtering.", + "Title": "Tools for Managing SSH and Git Credentials", + "Authors@R": "person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroenooms@gmail.com\", comment = c(ORCID = \"0000-0002-4035-0289\"))", + "Description": "Setup and retrieve HTTPS and SSH credentials for use with 'git' and other services. For HTTPS remotes the package interfaces the 'git-credential' utility which 'git' uses to store HTTP usernames and passwords. For SSH remotes we provide convenient functions to find or generate appropriate SSH keys. The package both helps the user to setup a local git installation, and also provides a back-end for git/ssh client libraries to authenticate with existing user credentials.", "License": "MIT + file LICENSE", - "URL": "https://rstudio.github.io/crosstalk/, https://github.com/rstudio/crosstalk", - "BugReports": "https://github.com/rstudio/crosstalk/issues", + "SystemRequirements": "git (optional)", + "Encoding": "UTF-8", "Imports": [ - "htmltools (>= 0.3.6)", + "openssl (>= 1.3)", + "sys (>= 2.1)", + "curl", "jsonlite", - "lazyeval", - "R6" + "askpass" ], "Suggests": [ - "bslib", - "ggplot2", - "sass", - "shiny", - "testthat (>= 2.1.0)" - ], - "Config/Needs/website": "jcheng5/d3scatter, DT, leaflet, rmarkdown", - "Encoding": "UTF-8", - "RoxygenNote": "7.3.2", - "NeedsCompilation": "no", - "Author": "Joe Cheng [aut], Carson Sievert [aut, cre] (ORCID: ), Posit Software, PBC [cph, fnd], jQuery Foundation [cph] (jQuery library and jQuery UI library), jQuery contributors [ctb, cph] (jQuery library; authors listed in inst/www/shared/jquery-AUTHORS.txt), Mark Otto [ctb] (Bootstrap library), Jacob Thornton [ctb] (Bootstrap library), Bootstrap contributors [ctb] (Bootstrap library), Twitter, Inc [cph] (Bootstrap library), Brian Reavis [ctb, cph] (selectize.js library), Kristopher Michael Kowal [ctb, cph] (es5-shim library), es5-shim contributors [ctb, cph] (es5-shim library), Denis Ineshin [ctb, cph] (ion.rangeSlider library), Sami Samhuri [ctb, cph] (Javascript strftime library)", - "Maintainer": "Carson Sievert ", - "Repository": "CRAN" - }, - "data.table": { - "Package": "data.table", - "Version": "1.17.8", - "Source": "Repository", - "Title": "Extension of `data.frame`", - "Depends": [ - "R (>= 3.3.0)" - ], - "Imports": [ - "methods" - ], - "Suggests": [ - "bit64 (>= 4.0.0)", - "bit (>= 4.0.4)", - "R.utils", - "xts", - "zoo (>= 1.8-1)", - "yaml", - "knitr", - "markdown" - ], - "Description": "Fast aggregation of large data (e.g. 100GB in RAM), fast ordered joins, fast add/modify/delete of columns by group using no copies at all, list columns, friendly and fast character-separated-value read/write. Offers a natural and flexible syntax, for faster development.", - "License": "MPL-2.0 | file LICENSE", - "URL": "https://r-datatable.com, https://Rdatatable.gitlab.io/data.table, https://github.com/Rdatatable/data.table", - "BugReports": "https://github.com/Rdatatable/data.table/issues", - "VignetteBuilder": "knitr", - "Encoding": "UTF-8", - "ByteCompile": "TRUE", - "Authors@R": "c( person(\"Tyson\",\"Barrett\", role=c(\"aut\",\"cre\"), email=\"t.barrett88@gmail.com\", comment = c(ORCID=\"0000-0002-2137-1391\")), person(\"Matt\",\"Dowle\", role=\"aut\", email=\"mattjdowle@gmail.com\"), person(\"Arun\",\"Srinivasan\", role=\"aut\", email=\"asrini@pm.me\"), person(\"Jan\",\"Gorecki\", role=\"aut\"), person(\"Michael\",\"Chirico\", role=\"aut\", comment = c(ORCID=\"0000-0003-0787-087X\")), person(\"Toby\",\"Hocking\", role=\"aut\", comment = c(ORCID=\"0000-0002-3146-0865\")), person(\"Benjamin\",\"Schwendinger\",role=\"aut\", comment = c(ORCID=\"0000-0003-3315-8114\")), person(\"Ivan\", \"Krylov\", role=\"aut\", email=\"ikrylov@disroot.org\", comment = c(ORCID=\"0000-0002-0172-3812\")), person(\"Pasha\",\"Stetsenko\", role=\"ctb\"), person(\"Tom\",\"Short\", role=\"ctb\"), person(\"Steve\",\"Lianoglou\", role=\"ctb\"), person(\"Eduard\",\"Antonyan\", role=\"ctb\"), person(\"Markus\",\"Bonsch\", role=\"ctb\"), person(\"Hugh\",\"Parsonage\", role=\"ctb\"), person(\"Scott\",\"Ritchie\", role=\"ctb\"), person(\"Kun\",\"Ren\", role=\"ctb\"), person(\"Xianying\",\"Tan\", role=\"ctb\"), person(\"Rick\",\"Saporta\", role=\"ctb\"), person(\"Otto\",\"Seiskari\", role=\"ctb\"), person(\"Xianghui\",\"Dong\", role=\"ctb\"), person(\"Michel\",\"Lang\", role=\"ctb\"), person(\"Watal\",\"Iwasaki\", role=\"ctb\"), person(\"Seth\",\"Wenchel\", role=\"ctb\"), person(\"Karl\",\"Broman\", role=\"ctb\"), person(\"Tobias\",\"Schmidt\", role=\"ctb\"), person(\"David\",\"Arenburg\", role=\"ctb\"), person(\"Ethan\",\"Smith\", role=\"ctb\"), person(\"Francois\",\"Cocquemas\", role=\"ctb\"), person(\"Matthieu\",\"Gomez\", role=\"ctb\"), person(\"Philippe\",\"Chataignon\", role=\"ctb\"), person(\"Nello\",\"Blaser\", role=\"ctb\"), person(\"Dmitry\",\"Selivanov\", role=\"ctb\"), person(\"Andrey\",\"Riabushenko\", role=\"ctb\"), person(\"Cheng\",\"Lee\", role=\"ctb\"), person(\"Declan\",\"Groves\", role=\"ctb\"), person(\"Daniel\",\"Possenriede\", role=\"ctb\"), person(\"Felipe\",\"Parages\", role=\"ctb\"), person(\"Denes\",\"Toth\", role=\"ctb\"), person(\"Mus\",\"Yaramaz-David\", role=\"ctb\"), person(\"Ayappan\",\"Perumal\", role=\"ctb\"), person(\"James\",\"Sams\", role=\"ctb\"), person(\"Martin\",\"Morgan\", role=\"ctb\"), person(\"Michael\",\"Quinn\", role=\"ctb\"), person(\"@javrucebo\",\"\", role=\"ctb\"), person(\"@marc-outins\",\"\", role=\"ctb\"), person(\"Roy\",\"Storey\", role=\"ctb\"), person(\"Manish\",\"Saraswat\", role=\"ctb\"), person(\"Morgan\",\"Jacob\", role=\"ctb\"), person(\"Michael\",\"Schubmehl\", role=\"ctb\"), person(\"Davis\",\"Vaughan\", role=\"ctb\"), person(\"Leonardo\",\"Silvestri\", role=\"ctb\"), person(\"Jim\",\"Hester\", role=\"ctb\"), person(\"Anthony\",\"Damico\", role=\"ctb\"), person(\"Sebastian\",\"Freundt\", role=\"ctb\"), person(\"David\",\"Simons\", role=\"ctb\"), person(\"Elliott\",\"Sales de Andrade\", role=\"ctb\"), person(\"Cole\",\"Miller\", role=\"ctb\"), person(\"Jens Peder\",\"Meldgaard\", role=\"ctb\"), person(\"Vaclav\",\"Tlapak\", role=\"ctb\"), person(\"Kevin\",\"Ushey\", role=\"ctb\"), person(\"Dirk\",\"Eddelbuettel\", role=\"ctb\"), person(\"Tony\",\"Fischetti\", role=\"ctb\"), person(\"Ofek\",\"Shilon\", role=\"ctb\"), person(\"Vadim\",\"Khotilovich\", role=\"ctb\"), person(\"Hadley\",\"Wickham\", role=\"ctb\"), person(\"Bennet\",\"Becker\", role=\"ctb\"), person(\"Kyle\",\"Haynes\", role=\"ctb\"), person(\"Boniface Christian\",\"Kamgang\", role=\"ctb\"), person(\"Olivier\",\"Delmarcell\", role=\"ctb\"), person(\"Josh\",\"O'Brien\", role=\"ctb\"), person(\"Dereck\",\"de Mezquita\", role=\"ctb\"), person(\"Michael\",\"Czekanski\", role=\"ctb\"), person(\"Dmitry\", \"Shemetov\", role=\"ctb\"), person(\"Nitish\", \"Jha\", role=\"ctb\"), person(\"Joshua\", \"Wu\", role=\"ctb\"), person(\"Iago\", \"Giné-Vázquez\", role=\"ctb\"), person(\"Anirban\", \"Chetia\", role=\"ctb\"), person(\"Doris\", \"Amoakohene\", role=\"ctb\"), person(\"Angel\", \"Feliz\", role=\"ctb\"), person(\"Michael\",\"Young\", role=\"ctb\"), person(\"Mark\", \"Seeto\", role=\"ctb\"), person(\"Philippe\", \"Grosjean\", role=\"ctb\"), person(\"Vincent\", \"Runge\", role=\"ctb\"), person(\"Christian\", \"Wia\", role=\"ctb\"), person(\"Elise\", \"Maigné\", role=\"ctb\"), person(\"Vincent\", \"Rocher\", role=\"ctb\"), person(\"Vijay\", \"Lulla\", role=\"ctb\"), person(\"Aljaž\", \"Sluga\", role=\"ctb\"), person(\"Bill\", \"Evans\", role=\"ctb\") )", - "NeedsCompilation": "yes", - "Author": "Tyson Barrett [aut, cre] (ORCID: ), Matt Dowle [aut], Arun Srinivasan [aut], Jan Gorecki [aut], Michael Chirico [aut] (ORCID: ), Toby Hocking [aut] (ORCID: ), Benjamin Schwendinger [aut] (ORCID: ), Ivan Krylov [aut] (ORCID: ), Pasha Stetsenko [ctb], Tom Short [ctb], Steve Lianoglou [ctb], Eduard Antonyan [ctb], Markus Bonsch [ctb], Hugh Parsonage [ctb], Scott Ritchie [ctb], Kun Ren [ctb], Xianying Tan [ctb], Rick Saporta [ctb], Otto Seiskari [ctb], Xianghui Dong [ctb], Michel Lang [ctb], Watal Iwasaki [ctb], Seth Wenchel [ctb], Karl Broman [ctb], Tobias Schmidt [ctb], David Arenburg [ctb], Ethan Smith [ctb], Francois Cocquemas [ctb], Matthieu Gomez [ctb], Philippe Chataignon [ctb], Nello Blaser [ctb], Dmitry Selivanov [ctb], Andrey Riabushenko [ctb], Cheng Lee [ctb], Declan Groves [ctb], Daniel Possenriede [ctb], Felipe Parages [ctb], Denes Toth [ctb], Mus Yaramaz-David [ctb], Ayappan Perumal [ctb], James Sams [ctb], Martin Morgan [ctb], Michael Quinn [ctb], @javrucebo [ctb], @marc-outins [ctb], Roy Storey [ctb], Manish Saraswat [ctb], Morgan Jacob [ctb], Michael Schubmehl [ctb], Davis Vaughan [ctb], Leonardo Silvestri [ctb], Jim Hester [ctb], Anthony Damico [ctb], Sebastian Freundt [ctb], David Simons [ctb], Elliott Sales de Andrade [ctb], Cole Miller [ctb], Jens Peder Meldgaard [ctb], Vaclav Tlapak [ctb], Kevin Ushey [ctb], Dirk Eddelbuettel [ctb], Tony Fischetti [ctb], Ofek Shilon [ctb], Vadim Khotilovich [ctb], Hadley Wickham [ctb], Bennet Becker [ctb], Kyle Haynes [ctb], Boniface Christian Kamgang [ctb], Olivier Delmarcell [ctb], Josh O'Brien [ctb], Dereck de Mezquita [ctb], Michael Czekanski [ctb], Dmitry Shemetov [ctb], Nitish Jha [ctb], Joshua Wu [ctb], Iago Giné-Vázquez [ctb], Anirban Chetia [ctb], Doris Amoakohene [ctb], Angel Feliz [ctb], Michael Young [ctb], Mark Seeto [ctb], Philippe Grosjean [ctb], Vincent Runge [ctb], Christian Wia [ctb], Elise Maigné [ctb], Vincent Rocher [ctb], Vijay Lulla [ctb], Aljaž Sluga [ctb], Bill Evans [ctb]", - "Maintainer": "Tyson Barrett ", - "Repository": "CRAN" - }, - "data.tree": { - "Package": "data.tree", - "Version": "1.2.0", - "Source": "Repository", - "Type": "Package", - "Title": "General Purpose Hierarchical Data Structure", - "Language": "en-US", - "Date": "2025-08-06", - "Authors@R": "c( person( \"Russ\", \"Hyde\", role = c(\"ctb\"), comment = \"improve dependencies\" ), person( \"Chris\", \"Hammill\", role = c(\"ctb\"), comment = \"improve getting\" ), person( \"Facundo\", \"Munoz\", role = c(\"ctb\"), comment = \"improve list conversion\" ), person( \"Markus\", \"Wamser\" , role = c(\"ctb\") , comment = \"fixed some typos\" ), person( \"Pierre\", \"Formont\" , role = c(\"ctb\") , comment = \"additional features\" ), person( \"Kent\", \"Russel\" , role = c(\"ctb\") , comment = \"documentation\" ), person( \"Noam\", \"Ross\" , role = c(\"ctb\") , comment = \"fixes\" ), person( \"Duncan\", \"Garmonsway\" , role = c(\"ctb\") , comment = \"fixes\" ), person( \"Christoph\", \"Glur\" , role = c(\"aut\", \"cre\") , comment = \"R interface\" , email = \"christoph.glur@powerpartners.pro\" ) )", - "VignetteBuilder": "knitr, rmarkdown", - "Imports": [ - "R6", - "stringi", - "methods" - ], - "Suggests": [ - "Formula", - "graphics", "testthat", "knitr", - "rmarkdown", - "ape", - "yaml", - "networkD3", + "rmarkdown" + ], + "RoxygenNote": "7.2.1", + "VignetteBuilder": "knitr", + "Language": "en-US", + "URL": "https://docs.ropensci.org/credentials/ https://r-lib.r-universe.dev/credentials", + "BugReports": "https://github.com/r-lib/credentials/issues", + "NeedsCompilation": "no", + "Author": "Jeroen Ooms [aut, cre] (ORCID: )", + "Maintainer": "Jeroen Ooms ", + "Repository": "CRAN" + }, + "curl": { + "Package": "curl", + "Version": "7.0.0", + "Source": "Repository", + "Type": "Package", + "Title": "A Modern and Flexible Web Client for R", + "Authors@R": "c( person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroenooms@gmail.com\", comment = c(ORCID = \"0000-0002-4035-0289\")), person(\"Hadley\", \"Wickham\", role = \"ctb\"), person(\"Posit Software, PBC\", role = \"cph\"))", + "Description": "Bindings to 'libcurl' for performing fully configurable HTTP/FTP requests where responses can be processed in memory, on disk, or streaming via the callback or connection interfaces. Some knowledge of 'libcurl' is recommended; for a more-user-friendly web client see the 'httr2' package which builds on this package with http specific tools and logic.", + "License": "MIT + file LICENSE", + "SystemRequirements": "libcurl (>= 7.73): libcurl-devel (rpm) or libcurl4-openssl-dev (deb)", + "URL": "https://jeroen.r-universe.dev/curl", + "BugReports": "https://github.com/jeroen/curl/issues", + "Suggests": [ + "spelling", + "testthat (>= 1.0.0)", + "knitr", "jsonlite", - "treemap", - "party", - "partykit", - "doParallel", - "foreach", - "htmlwidgets", - "DiagrammeR (>= 1.0.0)", - "mockery", - "rpart" + "later", + "rmarkdown", + "httpuv (>= 1.4.4)", + "webutils" ], - "Enhances": [ - "igraph" - ], - "Description": "Create tree structures from hierarchical data, and traverse the tree in various orders. Aggregate, cumulate, print, plot, convert to and from data.frame and more. 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Includes the clustering algorithms DBSCAN (density-based spatial clustering of applications with noise) and HDBSCAN (hierarchical DBSCAN), the ordering algorithm OPTICS (ordering points to identify the clustering structure), shared nearest neighbor clustering, and the outlier detection algorithms LOF (local outlier factor) and GLOSH (global-local outlier score from hierarchies). The implementations use the kd-tree data structure (from library ANN) for faster k-nearest neighbor search. An R interface to fast kNN and fixed-radius NN search is also provided. Hahsler, Piekenbrock and Doran (2019) .", + "License": "GPL (>= 2)", + "URL": "https://github.com/mhahsler/dbscan", + "BugReports": "https://github.com/mhahsler/dbscan/issues", + "Depends": [ + "R (>= 3.2.0)" + ], + "Imports": [ + "generics", + "graphics", + "Rcpp (>= 1.0.0)", + "stats" + ], + "Suggests": [ + "dendextend", + "fpc", + "igraph", + "knitr", + "microbenchmark", + "rmarkdown", + "testthat (>= 3.0.0)", + "tibble" + ], + "LinkingTo": [ + "Rcpp" + ], + "VignetteBuilder": "knitr", + "Config/testthat/edition": "3", + "Copyright": "ANN library is copyright by University of Maryland, Sunil Arya and David Mount. All other code is copyright by Michael Hahsler and Matthew Piekenbrock.", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.3", + "NeedsCompilation": "yes", + "Author": "Michael Hahsler [aut, cre, cph] (ORCID: ), Matthew Piekenbrock [aut, cph], Sunil Arya [ctb, cph], David Mount [ctb, cph], Claudia Malzer [ctb]", + "Maintainer": "Michael Hahsler ", "Repository": "CRAN" }, "digest": { "Package": "digest", - "Version": "0.6.37", + "Version": "0.6.39", "Source": "Repository", - "Authors@R": "c(person(\"Dirk\", \"Eddelbuettel\", role = c(\"aut\", \"cre\"), email = \"edd@debian.org\", comment = c(ORCID = \"0000-0001-6419-907X\")), person(\"Antoine\", \"Lucas\", role=\"ctb\"), person(\"Jarek\", \"Tuszynski\", role=\"ctb\"), person(\"Henrik\", \"Bengtsson\", role=\"ctb\", comment = c(ORCID = \"0000-0002-7579-5165\")), person(\"Simon\", \"Urbanek\", role=\"ctb\", comment = c(ORCID = \"0000-0003-2297-1732\")), person(\"Mario\", \"Frasca\", role=\"ctb\"), person(\"Bryan\", \"Lewis\", role=\"ctb\"), person(\"Murray\", \"Stokely\", role=\"ctb\"), person(\"Hannes\", \"Muehleisen\", role=\"ctb\"), person(\"Duncan\", \"Murdoch\", role=\"ctb\"), person(\"Jim\", \"Hester\", role=\"ctb\"), person(\"Wush\", \"Wu\", role=\"ctb\", comment = c(ORCID = \"0000-0001-5180-0567\")), person(\"Qiang\", \"Kou\", role=\"ctb\", comment = c(ORCID = \"0000-0001-6786-5453\")), person(\"Thierry\", \"Onkelinx\", role=\"ctb\", comment = c(ORCID = \"0000-0001-8804-4216\")), person(\"Michel\", \"Lang\", role=\"ctb\", comment = c(ORCID = \"0000-0001-9754-0393\")), person(\"Viliam\", \"Simko\", role=\"ctb\"), person(\"Kurt\", \"Hornik\", role=\"ctb\", comment = c(ORCID = \"0000-0003-4198-9911\")), person(\"Radford\", \"Neal\", role=\"ctb\", comment = c(ORCID = \"0000-0002-2473-3407\")), person(\"Kendon\", \"Bell\", role=\"ctb\", comment = c(ORCID = \"0000-0002-9093-8312\")), person(\"Matthew\", \"de Queljoe\", role=\"ctb\"), person(\"Dmitry\", \"Selivanov\", role=\"ctb\"), person(\"Ion\", \"Suruceanu\", role=\"ctb\"), person(\"Bill\", \"Denney\", role=\"ctb\"), person(\"Dirk\", \"Schumacher\", role=\"ctb\"), person(\"András\", \"Svraka\", role=\"ctb\"), person(\"Sergey\", \"Fedorov\", role=\"ctb\"), person(\"Will\", \"Landau\", role=\"ctb\", comment = c(ORCID = \"0000-0003-1878-3253\")), person(\"Floris\", \"Vanderhaeghe\", role=\"ctb\", comment = c(ORCID = \"0000-0002-6378-6229\")), person(\"Kevin\", \"Tappe\", role=\"ctb\"), person(\"Harris\", \"McGehee\", role=\"ctb\"), person(\"Tim\", \"Mastny\", role=\"ctb\"), person(\"Aaron\", \"Peikert\", role=\"ctb\", comment = c(ORCID = \"0000-0001-7813-818X\")), person(\"Mark\", \"van der Loo\", role=\"ctb\", comment = c(ORCID = \"0000-0002-9807-4686\")), person(\"Chris\", \"Muir\", role=\"ctb\", comment = c(ORCID = \"0000-0003-2555-3878\")), person(\"Moritz\", \"Beller\", role=\"ctb\", comment = c(ORCID = \"0000-0003-4852-0526\")), person(\"Sebastian\", \"Campbell\", role=\"ctb\"), person(\"Winston\", \"Chang\", role=\"ctb\", comment = c(ORCID = \"0000-0002-1576-2126\")), person(\"Dean\", \"Attali\", role=\"ctb\", comment = c(ORCID = \"0000-0002-5645-3493\")), person(\"Michael\", \"Chirico\", role=\"ctb\", comment = c(ORCID = \"0000-0003-0787-087X\")), person(\"Kevin\", \"Ushey\", role=\"ctb\"))", - "Date": "2024-08-19", + "Authors@R": "c(person(\"Dirk\", \"Eddelbuettel\", role = c(\"aut\", \"cre\"), email = \"edd@debian.org\", comment = c(ORCID = \"0000-0001-6419-907X\")), person(\"Antoine\", \"Lucas\", role=\"ctb\", comment = c(ORCID = \"0000-0002-8059-9767\")), person(\"Jarek\", \"Tuszynski\", role=\"ctb\"), person(\"Henrik\", \"Bengtsson\", role=\"ctb\", comment = c(ORCID = \"0000-0002-7579-5165\")), person(\"Simon\", \"Urbanek\", role=\"ctb\", comment = c(ORCID = \"0000-0003-2297-1732\")), person(\"Mario\", \"Frasca\", role=\"ctb\"), person(\"Bryan\", \"Lewis\", role=\"ctb\"), person(\"Murray\", \"Stokely\", role=\"ctb\"), person(\"Hannes\", \"Muehleisen\", role=\"ctb\", comment = c(ORCID = \"0000-0001-8552-0029\")), person(\"Duncan\", \"Murdoch\", role=\"ctb\"), person(\"Jim\", \"Hester\", role=\"ctb\", comment = c(ORCID = \"0000-0002-2739-7082\")), person(\"Wush\", \"Wu\", role=\"ctb\", comment = c(ORCID = \"0000-0001-5180-0567\")), person(\"Qiang\", \"Kou\", role=\"ctb\", comment = c(ORCID = \"0000-0001-6786-5453\")), person(\"Thierry\", \"Onkelinx\", role=\"ctb\", comment = c(ORCID = \"0000-0001-8804-4216\")), person(\"Michel\", \"Lang\", role=\"ctb\", comment = c(ORCID = \"0000-0001-9754-0393\")), person(\"Viliam\", \"Simko\", role=\"ctb\"), person(\"Kurt\", \"Hornik\", role=\"ctb\", comment = c(ORCID = \"0000-0003-4198-9911\")), person(\"Radford\", \"Neal\", role=\"ctb\", comment = c(ORCID = \"0000-0002-2473-3407\")), person(\"Kendon\", \"Bell\", role=\"ctb\", comment = c(ORCID = \"0000-0002-9093-8312\")), person(\"Matthew\", \"de Queljoe\", role=\"ctb\"), person(\"Dmitry\", \"Selivanov\", role=\"ctb\", comment = c(ORCID = \"0000-0003-0492-6647\")), person(\"Ion\", \"Suruceanu\", role=\"ctb\", comment = c(ORCID = \"0009-0005-6446-4909\")), person(\"Bill\", \"Denney\", role=\"ctb\", comment = c(ORCID = \"0000-0002-5759-428X\")), person(\"Dirk\", \"Schumacher\", role=\"ctb\"), person(\"András\", \"Svraka\", role=\"ctb\", comment = c(ORCID = \"0009-0008-8480-1329\")), person(\"Sergey\", \"Fedorov\", role=\"ctb\", comment = c(ORCID = \"0000-0002-5970-7233\")), person(\"Will\", \"Landau\", role=\"ctb\", comment = c(ORCID = \"0000-0003-1878-3253\")), person(\"Floris\", \"Vanderhaeghe\", role=\"ctb\", comment = c(ORCID = \"0000-0002-6378-6229\")), person(\"Kevin\", \"Tappe\", role=\"ctb\"), person(\"Harris\", \"McGehee\", role=\"ctb\"), person(\"Tim\", \"Mastny\", role=\"ctb\"), person(\"Aaron\", \"Peikert\", role=\"ctb\", comment = c(ORCID = \"0000-0001-7813-818X\")), person(\"Mark\", \"van der Loo\", role=\"ctb\", comment = c(ORCID = \"0000-0002-9807-4686\")), person(\"Chris\", \"Muir\", role=\"ctb\", comment = c(ORCID = \"0000-0003-2555-3878\")), person(\"Moritz\", \"Beller\", role=\"ctb\", comment = c(ORCID = \"0000-0003-4852-0526\")), person(\"Sebastian\", \"Campbell\", role=\"ctb\", comment = c(ORCID = \"0009-0000-5948-4503\")), person(\"Winston\", \"Chang\", role=\"ctb\", comment = c(ORCID = \"0000-0002-1576-2126\")), person(\"Dean\", \"Attali\", role=\"ctb\", comment = c(ORCID = \"0000-0002-5645-3493\")), person(\"Michael\", \"Chirico\", role=\"ctb\", comment = c(ORCID = \"0000-0003-0787-087X\")), person(\"Kevin\", \"Ushey\", role=\"ctb\", comment = c(ORCID = \"0000-0003-2880-7407\")), person(\"Carl\", \"Pearson\", role=\"ctb\", comment = c(ORCID = \"0000-0003-0701-7860\")))", + "Date": "2025-11-19", "Title": "Create Compact Hash Digests of R Objects", - "Description": "Implementation of a function 'digest()' for the creation of hash digests of arbitrary R objects (using the 'md5', 'sha-1', 'sha-256', 'crc32', 'xxhash', 'murmurhash', 'spookyhash', 'blake3', 'crc32c', 'xxh3_64', and 'xxh3_128' algorithms) permitting easy comparison of R language objects, as well as functions such as'hmac()' to create hash-based message authentication code. Please note that this package is not meant to be deployed for cryptographic purposes for which more comprehensive (and widely tested) libraries such as 'OpenSSL' should be used.", - "URL": "https://github.com/eddelbuettel/digest, https://dirk.eddelbuettel.com/code/digest.html", + "Description": "Implementation of a function 'digest()' for the creation of hash digests of arbitrary R objects (using the 'md5', 'sha-1', 'sha-256', 'crc32', 'xxhash', 'murmurhash', 'spookyhash', 'blake3', 'crc32c', 'xxh3_64', and 'xxh3_128' algorithms) permitting easy comparison of R language objects, as well as functions such as 'hmac()' to create hash-based message authentication code. Please note that this package is not meant to be deployed for cryptographic purposes for which more comprehensive (and widely tested) libraries such as 'OpenSSL' should be used.", + "URL": "https://github.com/eddelbuettel/digest, https://eddelbuettel.github.io/digest/, https://dirk.eddelbuettel.com/code/digest.html", "BugReports": "https://github.com/eddelbuettel/digest/issues", "Depends": [ "R (>= 3.3.0)" @@ -844,46 +823,16 @@ "License": "GPL (>= 2)", "Suggests": [ "tinytest", - "simplermarkdown" + "simplermarkdown", + "rbenchmark" ], "VignetteBuilder": "simplermarkdown", "Encoding": "UTF-8", "NeedsCompilation": "yes", - "Author": "Dirk Eddelbuettel [aut, cre] (), Antoine Lucas [ctb], Jarek Tuszynski [ctb], Henrik Bengtsson [ctb] (), Simon Urbanek [ctb] (), Mario Frasca [ctb], Bryan Lewis [ctb], Murray Stokely [ctb], Hannes Muehleisen [ctb], Duncan Murdoch [ctb], Jim Hester [ctb], Wush Wu [ctb] (), Qiang Kou [ctb] (), Thierry Onkelinx [ctb] (), Michel Lang [ctb] (), Viliam Simko [ctb], Kurt Hornik [ctb] (), Radford Neal [ctb] (), Kendon Bell [ctb] (), Matthew de Queljoe [ctb], Dmitry Selivanov [ctb], Ion Suruceanu [ctb], Bill Denney [ctb], Dirk Schumacher [ctb], András Svraka [ctb], Sergey Fedorov [ctb], Will Landau [ctb] (), Floris Vanderhaeghe [ctb] (), Kevin Tappe [ctb], Harris McGehee [ctb], Tim Mastny [ctb], Aaron Peikert [ctb] (), Mark van der Loo [ctb] (), Chris Muir [ctb] (), Moritz Beller [ctb] (), Sebastian Campbell [ctb], Winston Chang [ctb] (), Dean Attali [ctb] (), Michael Chirico [ctb] (), Kevin Ushey [ctb]", + "Author": "Dirk Eddelbuettel [aut, cre] (ORCID: ), Antoine Lucas [ctb] (ORCID: ), Jarek Tuszynski [ctb], Henrik Bengtsson [ctb] (ORCID: ), Simon Urbanek [ctb] (ORCID: ), Mario Frasca [ctb], Bryan Lewis [ctb], Murray Stokely [ctb], Hannes Muehleisen [ctb] (ORCID: ), Duncan Murdoch [ctb], Jim Hester [ctb] (ORCID: ), Wush Wu [ctb] (ORCID: ), Qiang Kou [ctb] (ORCID: ), Thierry Onkelinx [ctb] (ORCID: ), Michel Lang [ctb] (ORCID: ), Viliam Simko [ctb], Kurt Hornik [ctb] (ORCID: ), Radford Neal [ctb] (ORCID: ), Kendon Bell [ctb] (ORCID: ), Matthew de Queljoe [ctb], Dmitry Selivanov [ctb] (ORCID: ), Ion Suruceanu [ctb] (ORCID: ), Bill Denney [ctb] (ORCID: ), Dirk Schumacher [ctb], András Svraka [ctb] (ORCID: ), Sergey Fedorov [ctb] (ORCID: ), Will Landau [ctb] (ORCID: ), Floris Vanderhaeghe [ctb] (ORCID: ), Kevin Tappe [ctb], Harris McGehee [ctb], Tim Mastny [ctb], Aaron Peikert [ctb] (ORCID: ), Mark van der Loo [ctb] (ORCID: ), Chris Muir [ctb] (ORCID: ), Moritz Beller [ctb] (ORCID: ), Sebastian Campbell [ctb] (ORCID: ), Winston Chang [ctb] (ORCID: ), Dean Attali [ctb] (ORCID: ), Michael Chirico [ctb] (ORCID: ), Kevin Ushey [ctb] (ORCID: ), Carl Pearson [ctb] (ORCID: )", "Maintainer": "Dirk Eddelbuettel ", "Repository": "CRAN" }, - "dotCall64": { - "Package": "dotCall64", - "Version": "1.2", - "Source": "Repository", - "Type": "Package", - "Title": "Enhanced Foreign Function Interface Supporting Long Vectors", - "Date": "2024-10-03", - "Authors@R": "c(person(\"Kaspar\", \"Moesinger\", role = c(\"aut\"), email = \"kaspar.moesinger@gmail.com\"), person(\"Florian\", \"Gerber\", role = c(\"aut\"), email = \"flora.fauna.gerber@gmail.com\", comment = c(ORCID = \"0000-0001-8545-5263\")), person(\"Reinhard\", \"Furrer\", role = c(\"cre\", \"ctb\"), email = \"reinhard.furrer@uzh.ch\", comment = c(ORCID = \"0000-0002-6319-2332\")))", - "Description": "Provides .C64(), which is an enhanced version of .C() and .Fortran() from the foreign function interface. .C64() supports long vectors, arguments of type 64-bit integer, and provides a mechanism to avoid unnecessary copies of read-only and write-only arguments. This makes it a convenient and fast interface to C/C++ and Fortran code.", - "License": "GPL (>= 2)", - "URL": "https://git.math.uzh.ch/reinhard.furrer/dotCall64", - "BugReports": "https://git.math.uzh.ch/reinhard.furrer/dotCall64/-/issues", - "Depends": [ - "R (>= 4.0)" - ], - "Suggests": [ - "microbenchmark", - "RhpcBLASctl", - "RColorBrewer", - "roxygen2", - "spam", - "testthat" - ], - "Collate": "'vector_dc.R' 'dotCall64.R' 'zzz.R'", - "RoxygenNote": "7.2.3", - "NeedsCompilation": "yes", - "Author": "Kaspar Moesinger [aut], Florian Gerber [aut] (), Reinhard Furrer [cre, ctb] ()", - "Maintainer": "Reinhard Furrer ", - "Repository": "CRAN", - "Encoding": "UTF-8" - }, "dplyr": { "Package": "dplyr", "Version": "1.1.4", @@ -947,42 +896,6 @@ "Maintainer": "Hadley Wickham ", "Repository": "CRAN" }, - "e1071": { - "Package": "e1071", - "Version": "1.7-16", - "Source": "Repository", - "Title": "Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien", - "Imports": [ - "graphics", - "grDevices", - "class", - "stats", - "methods", - "utils", - "proxy" - ], - "Suggests": [ - "cluster", - "mlbench", - "nnet", - "randomForest", - "rpart", - "SparseM", - "xtable", - "Matrix", - "MASS", - "slam" - ], - "Authors@R": "c(person(given = \"David\", family = \"Meyer\", role = c(\"aut\", \"cre\"), email = \"David.Meyer@R-project.org\", comment = c(ORCID = \"0000-0002-5196-3048\")), person(given = \"Evgenia\", family = \"Dimitriadou\", role = c(\"aut\",\"cph\")), person(given = \"Kurt\", family = \"Hornik\", role = \"aut\", email = \"Kurt.Hornik@R-project.org\", comment = c(ORCID = \"0000-0003-4198-9911\")), person(given = \"Andreas\", family = \"Weingessel\", role = \"aut\"), person(given = \"Friedrich\", family = \"Leisch\", role = \"aut\"), person(given = \"Chih-Chung\", family = \"Chang\", role = c(\"ctb\",\"cph\"), comment = \"libsvm C++-code\"), person(given = \"Chih-Chen\", family = \"Lin\", role = c(\"ctb\",\"cph\"), comment = \"libsvm C++-code\"))", - "Description": "Functions for latent class analysis, short time Fourier transform, fuzzy clustering, support vector machines, shortest path computation, bagged clustering, naive Bayes classifier, generalized k-nearest neighbour ...", - "License": "GPL-2 | GPL-3", - "LazyLoad": "yes", - "NeedsCompilation": "yes", - "Author": "David Meyer [aut, cre] (), Evgenia Dimitriadou [aut, cph], Kurt Hornik [aut] (), Andreas Weingessel [aut], Friedrich Leisch [aut], Chih-Chung Chang [ctb, cph] (libsvm C++-code), Chih-Chen Lin [ctb, cph] (libsvm C++-code)", - "Maintainer": "David Meyer ", - "Repository": "CRAN", - "Encoding": "UTF-8" - }, "evaluate": { "Package": "evaluate", "Version": "1.0.5", @@ -1062,35 +975,6 @@ "Maintainer": "Winston Chang ", "Repository": "CRAN" }, - "fields": { - "Package": "fields", - "Version": "17.1", - "Source": "Repository", - "Date": "2025-09-03", - "Title": "Tools for Spatial Data", - "Authors@R": "c( person(\"Douglas\", \"Nychka\", role = c(\"aut\", \"cre\"), email = \"douglasnychka@gmail.com\"), person(\"Reinhard\", \"Furrer\", role = c(\"aut\"), email = \"reinhard.furrer@math.uzh.ch\"), person(\"John\", \"Paige\", role = c(\"aut\"), email = \"paigejo@uw.edu\"), person(\"Stephan\", \"Sain\", role = \"aut\", email = \"sainsr2@gmail.com\"), person(\"Florian\", \"Gerber\", role = \"aut\", email = \"flora.fauna.gerber@gmail.com\"), person(\"Matthew\", \"Iverson\", role = \"aut\", email = \"miverson@mines.edu\"), person(\"Rider\", \"Johnson\", role = \"aut\", email = \"riderjohnson@mines.edu\") )", - "Maintainer": "Douglas Nychka ", - "Description": "For curve, surface and function fitting with an emphasis on splines, spatial data, geostatistics, and spatial statistics. The major methods include Gaussian spatial process prediction (known as Kriging), cubic and thin plate splines, and compactly supported covariance functions for large data sets. The spline and spatial process methods are supported by functions that can determine the smoothing parameter (nugget and sill variance) and other covariance function parameters by cross validation and also by maximum likelihood. For spatial process prediction there is an easy to use function that also estimates the correlation scale (range parameter). A major feature is that any covariance function implemented in R and following a simple format can be used for spatial prediction. As included are fast approximations for prediction and conditional simulation for larger data sets. There are also many useful functions for plotting and working with spatial data as images. This package also contains an implementation of sparse matrix methods for large spatial data sets based the R sparse matrix package spam. Use help(fields) to get started and for an overview. All package graphics functions focus on extending base R graphics and are easy to interpret and modify. The fields source code is deliberately commented and provides useful explanations of numerical details as a companion to the manual pages. The commented source code can be viewed by expanding the source code version of this package and looking in the R subdirectory. The reference for fields can be generated by the citation function in R and has DOI . Development of this package was supported in part by the National Science Foundation Grant 1417857, the National Center for Atmospheric Research, and Colorado School of Mines. See the Fields URL for a vignette on using this package and some background on spatial statistics.", - "License": "GPL (>= 2)", - "URL": "https://github.com/dnychka/fieldsRPackage", - "Depends": [ - "R (>= 4.0.0)", - "methods", - "spam", - "viridisLite", - "RColorBrewer" - ], - "Imports": [ - "maps" - ], - "Suggests": [ - "mapproj" - ], - "NeedsCompilation": "yes", - "Repository": "CRAN", - "Author": "Douglas Nychka [aut, cre], Reinhard Furrer [aut], John Paige [aut], Stephan Sain [aut], Florian Gerber [aut], Matthew Iverson [aut], Rider Johnson [aut]", - "Encoding": "UTF-8" - }, "fontawesome": { "Package": "fontawesome", "Version": "0.5.3", @@ -1200,9 +1084,55 @@ "Maintainer": "Hadley Wickham ", "Repository": "CRAN" }, + "ggmap": { + "Package": "ggmap", + "Version": "4.0.2", + "Source": "Repository", + "Title": "Spatial Visualization with ggplot2", + "Description": "A collection of functions to visualize spatial data and models on top of static maps from various online sources (e.g Google Maps and Stamen Maps). It includes tools common to those tasks, including functions for geolocation and routing.", + "URL": "https://github.com/dkahle/ggmap", + "BugReports": "https://github.com/dkahle/ggmap/issues", + "Authors@R": "c(person(\"David\", \"Kahle\", email = \"david@kahle.io\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-9999-1558\")), person(\"Hadley\", \"Wickham\", email = \"h.wickham@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Scott\", \"Jackson\", email = \"scottmmjackson@gmail.com\", role = \"aut\"), person(\"Mikko\", \"Korpela\", email = \"mvkorpel@iki.fi\", role = \"ctb\"))", + "Depends": [ + "R (>= 3.1.0)", + "ggplot2 (>= 2.2.0)" + ], + "Imports": [ + "png", + "plyr", + "jpeg", + "digest", + "scales", + "dplyr", + "bitops", + "grid", + "glue", + "httr", + "stringr", + "purrr", + "magrittr", + "tibble", + "tidyr", + "rlang", + "cli" + ], + "Suggests": [ + "MASS", + "hexbin", + "testthat" + ], + "License": "GPL-2", + "LazyData": "true", + "RoxygenNote": "7.3.2", + "Encoding": "UTF-8", + "NeedsCompilation": "no", + "Author": "David Kahle [aut, cre] (ORCID: ), Hadley Wickham [aut] (ORCID: ), Scott Jackson [aut], Mikko Korpela [ctb]", + "Maintainer": "David Kahle ", + "Repository": "CRAN" + }, "ggplot2": { "Package": "ggplot2", - "Version": "4.0.0", + "Version": "4.0.1", "Source": "Repository", "Title": "Create Elegant Data Visualisations Using the Grammar of Graphics", "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Winston\", \"Chang\", role = \"aut\", comment = c(ORCID = \"0000-0002-1576-2126\")), person(\"Lionel\", \"Henry\", role = \"aut\"), person(\"Thomas Lin\", \"Pedersen\", , \"thomas.pedersen@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-5147-4711\")), person(\"Kohske\", \"Takahashi\", role = \"aut\"), person(\"Claus\", \"Wilke\", role = \"aut\", comment = c(ORCID = \"0000-0002-7470-9261\")), person(\"Kara\", \"Woo\", role = \"aut\", comment = c(ORCID = \"0000-0002-5125-4188\")), person(\"Hiroaki\", \"Yutani\", role = \"aut\", comment = c(ORCID = \"0000-0002-3385-7233\")), person(\"Dewey\", \"Dunnington\", role = \"aut\", comment = c(ORCID = \"0000-0002-9415-4582\")), person(\"Teun\", \"van den Brand\", role = \"aut\", comment = c(ORCID = \"0000-0002-9335-7468\")), person(\"Posit, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")) )", @@ -1234,6 +1164,7 @@ "ggplot2movies", "hexbin", "Hmisc", + "hms", "knitr", "mapproj", "maps", @@ -1244,9 +1175,9 @@ "nlme", "profvis", "quantreg", + "quarto", "ragg (>= 1.2.6)", "RColorBrewer", - "rmarkdown", "roxygen2", "rpart", "sf (>= 0.7-3)", @@ -1259,13 +1190,13 @@ "Enhances": [ "sp" ], - "VignetteBuilder": "knitr", + "VignetteBuilder": "quarto", "Config/Needs/website": "ggtext, tidyr, forcats, tidyverse/tidytemplate", "Config/testthat/edition": "3", "Config/usethis/last-upkeep": "2025-04-23", "Encoding": "UTF-8", "LazyData": "true", - "RoxygenNote": "7.3.2", + "RoxygenNote": "7.3.3", "Collate": "'ggproto.R' 'ggplot-global.R' 'aaa-.R' 'aes-colour-fill-alpha.R' 'aes-evaluation.R' 'aes-group-order.R' 'aes-linetype-size-shape.R' 'aes-position.R' 'all-classes.R' 'compat-plyr.R' 'utilities.R' 'aes.R' 'annotation-borders.R' 'utilities-checks.R' 'legend-draw.R' 'geom-.R' 'annotation-custom.R' 'annotation-logticks.R' 'scale-type.R' 'layer.R' 'make-constructor.R' 'geom-polygon.R' 'geom-map.R' 'annotation-map.R' 'geom-raster.R' 'annotation-raster.R' 'annotation.R' 'autolayer.R' 'autoplot.R' 'axis-secondary.R' 'backports.R' 'bench.R' 'bin.R' 'coord-.R' 'coord-cartesian-.R' 'coord-fixed.R' 'coord-flip.R' 'coord-map.R' 'coord-munch.R' 'coord-polar.R' 'coord-quickmap.R' 'coord-radial.R' 'coord-sf.R' 'coord-transform.R' 'data.R' 'docs_layer.R' 'facet-.R' 'facet-grid-.R' 'facet-null.R' 'facet-wrap.R' 'fortify-map.R' 'fortify-models.R' 'fortify-spatial.R' 'fortify.R' 'stat-.R' 'geom-abline.R' 'geom-rect.R' 'geom-bar.R' 'geom-tile.R' 'geom-bin2d.R' 'geom-blank.R' 'geom-boxplot.R' 'geom-col.R' 'geom-path.R' 'geom-contour.R' 'geom-point.R' 'geom-count.R' 'geom-crossbar.R' 'geom-segment.R' 'geom-curve.R' 'geom-defaults.R' 'geom-ribbon.R' 'geom-density.R' 'geom-density2d.R' 'geom-dotplot.R' 'geom-errorbar.R' 'geom-freqpoly.R' 'geom-function.R' 'geom-hex.R' 'geom-histogram.R' 'geom-hline.R' 'geom-jitter.R' 'geom-label.R' 'geom-linerange.R' 'geom-pointrange.R' 'geom-quantile.R' 'geom-rug.R' 'geom-sf.R' 'geom-smooth.R' 'geom-spoke.R' 'geom-text.R' 'geom-violin.R' 'geom-vline.R' 'ggplot2-package.R' 'grob-absolute.R' 'grob-dotstack.R' 'grob-null.R' 'grouping.R' 'properties.R' 'margins.R' 'theme-elements.R' 'guide-.R' 'guide-axis.R' 'guide-axis-logticks.R' 'guide-axis-stack.R' 'guide-axis-theta.R' 'guide-legend.R' 'guide-bins.R' 'guide-colorbar.R' 'guide-colorsteps.R' 'guide-custom.R' 'guide-none.R' 'guide-old.R' 'guides-.R' 'guides-grid.R' 'hexbin.R' 'import-standalone-obj-type.R' 'import-standalone-types-check.R' 'labeller.R' 'labels.R' 'layer-sf.R' 'layout.R' 'limits.R' 'performance.R' 'plot-build.R' 'plot-construction.R' 'plot-last.R' 'plot.R' 'position-.R' 'position-collide.R' 'position-dodge.R' 'position-dodge2.R' 'position-identity.R' 'position-jitter.R' 'position-jitterdodge.R' 'position-nudge.R' 'position-stack.R' 'quick-plot.R' 'reshape-add-margins.R' 'save.R' 'scale-.R' 'scale-alpha.R' 'scale-binned.R' 'scale-brewer.R' 'scale-colour.R' 'scale-continuous.R' 'scale-date.R' 'scale-discrete-.R' 'scale-expansion.R' 'scale-gradient.R' 'scale-grey.R' 'scale-hue.R' 'scale-identity.R' 'scale-linetype.R' 'scale-linewidth.R' 'scale-manual.R' 'scale-shape.R' 'scale-size.R' 'scale-steps.R' 'scale-view.R' 'scale-viridis.R' 'scales-.R' 'stat-align.R' 'stat-bin.R' 'stat-summary-2d.R' 'stat-bin2d.R' 'stat-bindot.R' 'stat-binhex.R' 'stat-boxplot.R' 'stat-connect.R' 'stat-contour.R' 'stat-count.R' 'stat-density-2d.R' 'stat-density.R' 'stat-ecdf.R' 'stat-ellipse.R' 'stat-function.R' 'stat-identity.R' 'stat-manual.R' 'stat-qq-line.R' 'stat-qq.R' 'stat-quantilemethods.R' 'stat-sf-coordinates.R' 'stat-sf.R' 'stat-smooth-methods.R' 'stat-smooth.R' 'stat-sum.R' 'stat-summary-bin.R' 'stat-summary-hex.R' 'stat-summary.R' 'stat-unique.R' 'stat-ydensity.R' 'summarise-plot.R' 'summary.R' 'theme.R' 'theme-defaults.R' 'theme-current.R' 'theme-sub.R' 'utilities-break.R' 'utilities-grid.R' 'utilities-help.R' 'utilities-patterns.R' 'utilities-resolution.R' 'utilities-tidy-eval.R' 'zxx.R' 'zzz.R'", "NeedsCompilation": "no", "Author": "Hadley Wickham [aut] (ORCID: ), Winston Chang [aut] (ORCID: ), Lionel Henry [aut], Thomas Lin Pedersen [aut, cre] (ORCID: ), Kohske Takahashi [aut], Claus Wilke [aut] (ORCID: ), Kara Woo [aut] (ORCID: ), Hiroaki Yutani [aut] (ORCID: ), Dewey Dunnington [aut] (ORCID: ), Teun van den Brand [aut] (ORCID: ), Posit, PBC [cph, fnd] (ROR: )", @@ -1313,37 +1244,6 @@ "Maintainer": "Jennifer Bryan ", "Repository": "CRAN" }, - "gridExtra": { - "Package": "gridExtra", - "Version": "2.3", - "Source": "Repository", - "Authors@R": "c(person(\"Baptiste\", \"Auguie\", email = \"baptiste.auguie@gmail.com\", role = c(\"aut\", \"cre\")), person(\"Anton\", \"Antonov\", email = \"tonytonov@gmail.com\", role = c(\"ctb\")))", - "License": "GPL (>= 2)", - "Title": "Miscellaneous Functions for \"Grid\" Graphics", - "Type": "Package", - "Description": "Provides a number of user-level functions to work with \"grid\" graphics, notably to arrange multiple grid-based plots on a page, and draw tables.", - "VignetteBuilder": "knitr", - "Imports": [ - "gtable", - "grid", - "grDevices", - "graphics", - "utils" - ], - "Suggests": [ - "ggplot2", - "egg", - "lattice", - "knitr", - "testthat" - ], - "RoxygenNote": "6.0.1", - "NeedsCompilation": "no", - "Author": "Baptiste Auguie [aut, cre], Anton Antonov [ctb]", - "Maintainer": "Baptiste Auguie ", - "Repository": "CRAN", - "Encoding": "UTF-8" - }, "gtable": { "Package": "gtable", "Version": "0.3.6", @@ -1450,7 +1350,7 @@ }, "htmltools": { "Package": "htmltools", - "Version": "0.5.8.1", + "Version": "0.5.9", "Source": "Repository", "Type": "Package", "Title": "Tools for HTML", @@ -1484,125 +1384,67 @@ "Config/Needs/check": "knitr", "Config/Needs/website": "rstudio/quillt, bench", "Encoding": "UTF-8", - "RoxygenNote": "7.3.1", + "RoxygenNote": "7.3.3", "Collate": "'colors.R' 'fill.R' 'html_dependency.R' 'html_escape.R' 'html_print.R' 'htmltools-package.R' 'images.R' 'known_tags.R' 'selector.R' 'staticimports.R' 'tag_query.R' 'utils.R' 'tags.R' 'template.R'", "NeedsCompilation": "yes", - "Author": "Joe Cheng [aut], Carson Sievert [aut, cre] (), Barret Schloerke [aut] (), Winston Chang [aut] (), Yihui Xie [aut], Jeff Allen [aut], Posit Software, PBC [cph, fnd]", + "Author": "Joe Cheng [aut], Carson Sievert [aut, cre] (ORCID: ), Barret Schloerke [aut] (ORCID: ), Winston Chang [aut] (ORCID: ), Yihui Xie [aut], Jeff Allen [aut], Posit Software, PBC [cph, fnd]", "Maintainer": "Carson Sievert ", "Repository": "CRAN" }, - "htmlwidgets": { - "Package": "htmlwidgets", - "Version": "1.6.4", + "httr": { + "Package": "httr", + "Version": "1.4.7", "Source": "Repository", - "Type": "Package", - "Title": "HTML Widgets for R", - "Authors@R": "c( person(\"Ramnath\", \"Vaidyanathan\", role = c(\"aut\", \"cph\")), person(\"Yihui\", \"Xie\", role = \"aut\"), person(\"JJ\", \"Allaire\", role = \"aut\"), person(\"Joe\", \"Cheng\", , \"joe@posit.co\", role = \"aut\"), person(\"Carson\", \"Sievert\", , \"carson@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-4958-2844\")), person(\"Kenton\", \"Russell\", role = c(\"aut\", \"cph\")), person(\"Ellis\", \"Hughes\", role = \"ctb\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", - "Description": "A framework for creating HTML widgets that render in various contexts including the R console, 'R Markdown' documents, and 'Shiny' web applications.", + "Title": "Tools for Working with URLs and HTTP", + "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\")), person(\"Posit, PBC\", role = c(\"cph\", \"fnd\")) )", + "Description": "Useful tools for working with HTTP organised by HTTP verbs (GET(), POST(), etc). Configuration functions make it easy to control additional request components (authenticate(), add_headers() and so on).", "License": "MIT + file LICENSE", - "URL": "https://github.com/ramnathv/htmlwidgets", - "BugReports": "https://github.com/ramnathv/htmlwidgets/issues", + "URL": "https://httr.r-lib.org/, https://github.com/r-lib/httr", + "BugReports": "https://github.com/r-lib/httr/issues", + "Depends": [ + "R (>= 3.5)" + ], "Imports": [ - "grDevices", - "htmltools (>= 0.5.7)", - "jsonlite (>= 0.9.16)", - "knitr (>= 1.8)", - "rmarkdown", - "yaml" + "curl (>= 5.0.2)", + "jsonlite", + "mime", + "openssl (>= 0.8)", + "R6" ], "Suggests": [ - "testthat" - ], - "Enhances": [ - "shiny (>= 1.1)" + "covr", + "httpuv", + "jpeg", + "knitr", + "png", + "readr", + "rmarkdown", + "testthat (>= 0.8.0)", + "xml2" ], "VignetteBuilder": "knitr", + "Config/Needs/website": "tidyverse/tidytemplate", "Encoding": "UTF-8", "RoxygenNote": "7.2.3", "NeedsCompilation": "no", - "Author": "Ramnath Vaidyanathan [aut, cph], Yihui Xie [aut], JJ Allaire [aut], Joe Cheng [aut], Carson Sievert [aut, cre] (), Kenton Russell [aut, cph], Ellis Hughes [ctb], Posit Software, PBC [cph, fnd]", - "Maintainer": "Carson Sievert ", - "Repository": "CRAN" - }, - "igraph": { - "Package": "igraph", - "Version": "2.2.0", - "Source": "Repository", - "Title": "Network Analysis and Visualization", - "Authors@R": "c( person(\"Gábor\", \"Csárdi\", , \"csardi.gabor@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0001-7098-9676\")), person(\"Tamás\", \"Nepusz\", , \"ntamas@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-1451-338X\")), person(\"Vincent\", \"Traag\", role = \"aut\", comment = c(ORCID = \"0000-0003-3170-3879\")), person(\"Szabolcs\", \"Horvát\", , \"szhorvat@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-3100-523X\")), person(\"Fabio\", \"Zanini\", , \"fabio.zanini@unsw.edu.au\", role = \"aut\", comment = c(ORCID = \"0000-0001-7097-8539\")), person(\"Daniel\", \"Noom\", role = \"aut\"), person(\"Kirill\", \"Müller\", , \"kirill@cynkra.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-1416-3412\")), person(\"Michael\", \"Antonov\", role = \"ctb\"), person(\"Chan Zuckerberg Initiative\", role = \"fnd\", comment = c(ROR = \"02qenvm24\")), person(\"David\", \"Schoch\", , \"david.schoch@cynkra.com\", role = \"aut\", comment = c(ORCID = \"0000-0003-2952-4812\")), person(\"Maëlle\", \"Salmon\", , \"maelle@cynkra.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-2815-0399\")) )", - "Description": "Routines for simple graphs and network analysis. It can handle large graphs very well and provides functions for generating random and regular graphs, graph visualization, centrality methods and much more.", - "License": "GPL (>= 2)", - "URL": "https://r.igraph.org/, https://igraph.org/, https://igraph.discourse.group/", - "BugReports": "https://github.com/igraph/rigraph/issues", - "Depends": [ - "methods", - "R (>= 3.5.0)" - ], - "Imports": [ - "cli", - "graphics", - "grDevices", - "lifecycle", - "magrittr", - "Matrix", - "pkgconfig (>= 2.0.0)", - "rlang (>= 1.1.0)", - "stats", - "utils", - "vctrs" - ], - "Suggests": [ - "ape (>= 5.7-0.1)", - "callr", - "decor", - "digest", - "igraphdata", - "knitr", - "rgl (>= 1.3.14)", - "rmarkdown", - "scales", - "stats4", - "tcltk", - "testthat", - "vdiffr", - "withr" - ], - "Enhances": [ - "graph" - ], - "LinkingTo": [ - "cpp11 (>= 0.5.0)" - ], - "VignetteBuilder": "knitr", - "Config/build/compilation-database": "false", - "Config/build/never-clean": "true", - "Config/comment/compilation-database": "Generate manually with pkgload:::generate_db() for faster pkgload::load_all()", - "Config/Needs/build": "r-lib/roxygen2, devtools, irlba, pkgconfig, igraph/igraph.r2cdocs, moodymudskipper/devtag", - "Config/Needs/coverage": "covr", - "Config/Needs/website": "here, readr, tibble, xmlparsedata, xml2", - "Config/testthat/edition": "3", - "Config/testthat/parallel": "true", - "Config/testthat/start-first": "aaa-auto, vs-es, scan, vs-operators, weakref, watts.strogatz.game", - "Encoding": "UTF-8", - "RoxygenNote": "7.3.3.9000", - "SystemRequirements": "libxml2 (optional), glpk (>= 4.57, optional)", - "NeedsCompilation": "yes", - "Author": "Gábor Csárdi [aut] (ORCID: ), Tamás Nepusz [aut] (ORCID: ), Vincent Traag [aut] (ORCID: ), Szabolcs Horvát [aut] (ORCID: ), Fabio Zanini [aut] (ORCID: ), Daniel Noom [aut], Kirill Müller [aut, cre] (ORCID: ), Michael Antonov [ctb], Chan Zuckerberg Initiative [fnd] (ROR: ), David Schoch [aut] (ORCID: ), Maëlle Salmon [aut] (ORCID: )", - "Maintainer": "Kirill Müller ", + "Author": "Hadley Wickham [aut, cre], Posit, PBC [cph, fnd]", + "Maintainer": "Hadley Wickham ", "Repository": "CRAN" }, "isoband": { "Package": "isoband", - "Version": "0.2.7", + "Version": "0.3.0", "Source": "Repository", "Title": "Generate Isolines and Isobands from Regularly Spaced Elevation Grids", - "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Claus O.\", \"Wilke\", , \"wilke@austin.utexas.edu\", role = \"aut\", comment = c(\"Original author\", ORCID = \"0000-0002-7470-9261\")), person(\"Thomas Lin\", \"Pedersen\", , \"thomasp85@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-5147-4711\")) )", + "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Claus O.\", \"Wilke\", , \"wilke@austin.utexas.edu\", role = \"aut\", comment = c(\"Original author\", ORCID = \"0000-0002-7470-9261\")), person(\"Thomas Lin\", \"Pedersen\", , \"thomas.pedersen@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-5147-4711\")), person(\"Posit, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")) )", "Description": "A fast C++ implementation to generate contour lines (isolines) and contour polygons (isobands) from regularly spaced grids containing elevation data.", "License": "MIT + file LICENSE", - "URL": "https://isoband.r-lib.org", + "URL": "https://isoband.r-lib.org, https://github.com/r-lib/isoband", "BugReports": "https://github.com/r-lib/isoband/issues", "Imports": [ + "cli", "grid", + "rlang", "utils" ], "Suggests": [ @@ -1610,23 +1452,47 @@ "ggplot2", "knitr", "magick", - "microbenchmark", + "bench", "rmarkdown", "sf", - "testthat", + "testthat (>= 3.0.0)", "xml2" ], "VignetteBuilder": "knitr", "Config/Needs/website": "tidyverse/tidytemplate", "Config/testthat/edition": "3", + "Config/usethis/last-upkeep": "2025-12-05", "Encoding": "UTF-8", - "RoxygenNote": "7.2.3", - "SystemRequirements": "C++11", + "RoxygenNote": "7.3.3", + "Config/build/compilation-database": "true", + "LinkingTo": [ + "cpp11" + ], "NeedsCompilation": "yes", - "Author": "Hadley Wickham [aut, cre] (), Claus O. Wilke [aut] (Original author, ), Thomas Lin Pedersen [aut] ()", - "Maintainer": "Hadley Wickham ", + "Author": "Hadley Wickham [aut] (ORCID: ), Claus O. Wilke [aut] (Original author, ORCID: ), Thomas Lin Pedersen [aut, cre] (ORCID: ), Posit, PBC [cph, fnd] (ROR: )", + "Maintainer": "Thomas Lin Pedersen ", "Repository": "CRAN" }, + "jpeg": { + "Package": "jpeg", + "Version": "0.1-11", + "Source": "Repository", + "Title": "Read and write JPEG images", + "Author": "Simon Urbanek [aut, cre, cph] (https://urbanek.org, )", + "Authors@R": "person(\"Simon\", \"Urbanek\", role=c(\"aut\",\"cre\",\"cph\"), email=\"Simon.Urbanek@r-project.org\", comment=c(\"https://urbanek.org\", ORCID=\"0000-0003-2297-1732\"))", + "Maintainer": "Simon Urbanek ", + "Depends": [ + "R (>= 2.9.0)" + ], + "Description": "This package provides an easy and simple way to read, write and display bitmap images stored in the JPEG format. It can read and write both files and in-memory raw vectors.", + "License": "GPL-2 | GPL-3", + "SystemRequirements": "libjpeg", + "URL": "https://www.rforge.net/jpeg/", + "BugReports": "https://github.com/s-u/jpeg/issues", + "NeedsCompilation": "yes", + "Repository": "CRAN", + "Encoding": "UTF-8" + }, "jquerylib": { "Package": "jquerylib", "Version": "0.1.4", @@ -1681,7 +1547,7 @@ }, "knitr": { "Package": "knitr", - "Version": "1.50", + "Version": "1.51", "Source": "Repository", "Type": "Package", "Title": "A General-Purpose Package for Dynamic Report Generation in R", @@ -1695,12 +1561,11 @@ "highr (>= 0.11)", "methods", "tools", - "xfun (>= 0.51)", + "xfun (>= 0.52)", "yaml (>= 2.1.19)" ], "Suggests": [ "bslib", - "codetools", "DBI (>= 0.4-1)", "digest", "formatR", @@ -1712,6 +1577,8 @@ "magick", "litedown", "markdown (>= 1.3)", + "otel", + "otelsdk", "png", "ragg", "reticulate (>= 1.4)", @@ -1736,10 +1603,10 @@ "Encoding": "UTF-8", "VignetteBuilder": "litedown, knitr", "SystemRequirements": "Package vignettes based on R Markdown v2 or reStructuredText require Pandoc (http://pandoc.org). The function rst2pdf() requires rst2pdf (https://github.com/rst2pdf/rst2pdf).", - "Collate": "'block.R' 'cache.R' 'citation.R' 'hooks-html.R' 'plot.R' 'utils.R' 'defaults.R' 'concordance.R' 'engine.R' 'highlight.R' 'themes.R' 'header.R' 'hooks-asciidoc.R' 'hooks-chunk.R' 'hooks-extra.R' 'hooks-latex.R' 'hooks-md.R' 'hooks-rst.R' 'hooks-textile.R' 'hooks.R' 'output.R' 'package.R' 'pandoc.R' 'params.R' 'parser.R' 'pattern.R' 'rocco.R' 'spin.R' 'table.R' 'template.R' 'utils-conversion.R' 'utils-rd2html.R' 'utils-string.R' 'utils-sweave.R' 'utils-upload.R' 'utils-vignettes.R' 'zzz.R'", - "RoxygenNote": "7.3.2", + "Collate": "'block.R' 'cache.R' 'citation.R' 'hooks-html.R' 'plot.R' 'utils.R' 'defaults.R' 'concordance.R' 'engine.R' 'highlight.R' 'themes.R' 'header.R' 'hooks-asciidoc.R' 'hooks-chunk.R' 'hooks-extra.R' 'hooks-latex.R' 'hooks-md.R' 'hooks-rst.R' 'hooks-textile.R' 'hooks.R' 'otel.R' 'output.R' 'package.R' 'pandoc.R' 'params.R' 'parser.R' 'pattern.R' 'rocco.R' 'spin.R' 'table.R' 'template.R' 'utils-conversion.R' 'utils-rd2html.R' 'utils-string.R' 'utils-sweave.R' 'utils-upload.R' 'utils-vignettes.R' 'zzz.R'", + "RoxygenNote": "7.3.3", "NeedsCompilation": "no", - "Author": "Yihui Xie [aut, cre] (, https://yihui.org), Abhraneel Sarma [ctb], Adam Vogt [ctb], Alastair Andrew [ctb], Alex Zvoleff [ctb], Amar Al-Zubaidi [ctb], Andre Simon [ctb] (the CSS files under inst/themes/ were derived from the Highlight package http://www.andre-simon.de), Aron Atkins [ctb], Aaron Wolen [ctb], Ashley Manton [ctb], Atsushi Yasumoto [ctb] (), Ben Baumer [ctb], Brian Diggs [ctb], Brian Zhang [ctb], Bulat Yapparov [ctb], Cassio Pereira [ctb], Christophe Dervieux [ctb], David Hall [ctb], David Hugh-Jones [ctb], David Robinson [ctb], Doug Hemken [ctb], Duncan Murdoch [ctb], Elio Campitelli [ctb], Ellis Hughes [ctb], Emily Riederer [ctb], Fabian Hirschmann [ctb], Fitch Simeon [ctb], Forest Fang [ctb], Frank E Harrell Jr [ctb] (the Sweavel package at inst/misc/Sweavel.sty), Garrick Aden-Buie [ctb], Gregoire Detrez [ctb], Hadley Wickham [ctb], Hao Zhu [ctb], Heewon Jeon [ctb], Henrik Bengtsson [ctb], Hiroaki Yutani [ctb], Ian Lyttle [ctb], Hodges Daniel [ctb], Jacob Bien [ctb], Jake Burkhead [ctb], James Manton [ctb], Jared Lander [ctb], Jason Punyon [ctb], Javier Luraschi [ctb], Jeff Arnold [ctb], Jenny Bryan [ctb], Jeremy Ashkenas [ctb, cph] (the CSS file at inst/misc/docco-classic.css), Jeremy Stephens [ctb], Jim Hester [ctb], Joe Cheng [ctb], Johannes Ranke [ctb], John Honaker [ctb], John Muschelli [ctb], Jonathan Keane [ctb], JJ Allaire [ctb], Johan Toloe [ctb], Jonathan Sidi [ctb], Joseph Larmarange [ctb], Julien Barnier [ctb], Kaiyin Zhong [ctb], Kamil Slowikowski [ctb], Karl Forner [ctb], Kevin K. Smith [ctb], Kirill Mueller [ctb], Kohske Takahashi [ctb], Lorenz Walthert [ctb], Lucas Gallindo [ctb], Marius Hofert [ctb], Martin Modrák [ctb], Michael Chirico [ctb], Michael Friendly [ctb], Michal Bojanowski [ctb], Michel Kuhlmann [ctb], Miller Patrick [ctb], Nacho Caballero [ctb], Nick Salkowski [ctb], Niels Richard Hansen [ctb], Noam Ross [ctb], Obada Mahdi [ctb], Pavel N. Krivitsky [ctb] (), Pedro Faria [ctb], Qiang Li [ctb], Ramnath Vaidyanathan [ctb], Richard Cotton [ctb], Robert Krzyzanowski [ctb], Rodrigo Copetti [ctb], Romain Francois [ctb], Ruaridh Williamson [ctb], Sagiru Mati [ctb] (), Scott Kostyshak [ctb], Sebastian Meyer [ctb], Sietse Brouwer [ctb], Simon de Bernard [ctb], Sylvain Rousseau [ctb], Taiyun Wei [ctb], Thibaut Assus [ctb], Thibaut Lamadon [ctb], Thomas Leeper [ctb], Tim Mastny [ctb], Tom Torsney-Weir [ctb], Trevor Davis [ctb], Viktoras Veitas [ctb], Weicheng Zhu [ctb], Wush Wu [ctb], Zachary Foster [ctb], Zhian N. Kamvar [ctb] (), Posit Software, PBC [cph, fnd]", + "Author": "Yihui Xie [aut, cre] (ORCID: , URL: https://yihui.org), Abhraneel Sarma [ctb], Adam Vogt [ctb], Alastair Andrew [ctb], Alex Zvoleff [ctb], Amar Al-Zubaidi [ctb], Andre Simon [ctb] (the CSS files under inst/themes/ were derived from the Highlight package http://www.andre-simon.de), Aron Atkins [ctb], Aaron Wolen [ctb], Ashley Manton [ctb], Atsushi Yasumoto [ctb] (ORCID: ), Ben Baumer [ctb], Brian Diggs [ctb], Brian Zhang [ctb], Bulat Yapparov [ctb], Cassio Pereira [ctb], Christophe Dervieux [ctb], David Hall [ctb], David Hugh-Jones [ctb], David Robinson [ctb], Doug Hemken [ctb], Duncan Murdoch [ctb], Elio Campitelli [ctb], Ellis Hughes [ctb], Emily Riederer [ctb], Fabian Hirschmann [ctb], Fitch Simeon [ctb], Forest Fang [ctb], Frank E Harrell Jr [ctb] (the Sweavel package at inst/misc/Sweavel.sty), Garrick Aden-Buie [ctb], Gregoire Detrez [ctb], Hadley Wickham [ctb], Hao Zhu [ctb], Heewon Jeon [ctb], Henrik Bengtsson [ctb], Hiroaki Yutani [ctb], Ian Lyttle [ctb], Hodges Daniel [ctb], Jacob Bien [ctb], Jake Burkhead [ctb], James Manton [ctb], Jared Lander [ctb], Jason Punyon [ctb], Javier Luraschi [ctb], Jeff Arnold [ctb], Jenny Bryan [ctb], Jeremy Ashkenas [ctb, cph] (the CSS file at inst/misc/docco-classic.css), Jeremy Stephens [ctb], Jim Hester [ctb], Joe Cheng [ctb], Johannes Ranke [ctb], John Honaker [ctb], John Muschelli [ctb], Jonathan Keane [ctb], JJ Allaire [ctb], Johan Toloe [ctb], Jonathan Sidi [ctb], Joseph Larmarange [ctb], Julien Barnier [ctb], Kaiyin Zhong [ctb], Kamil Slowikowski [ctb], Karl Forner [ctb], Kevin K. Smith [ctb], Kirill Mueller [ctb], Kohske Takahashi [ctb], Lorenz Walthert [ctb], Lucas Gallindo [ctb], Marius Hofert [ctb], Martin Modrák [ctb], Michael Chirico [ctb], Michael Friendly [ctb], Michal Bojanowski [ctb], Michel Kuhlmann [ctb], Miller Patrick [ctb], Nacho Caballero [ctb], Nick Salkowski [ctb], Niels Richard Hansen [ctb], Noam Ross [ctb], Obada Mahdi [ctb], Pavel N. Krivitsky [ctb] (ORCID: ), Pedro Faria [ctb], Qiang Li [ctb], Ramnath Vaidyanathan [ctb], Richard Cotton [ctb], Robert Krzyzanowski [ctb], Rodrigo Copetti [ctb], Romain Francois [ctb], Ruaridh Williamson [ctb], Sagiru Mati [ctb] (ORCID: ), Scott Kostyshak [ctb], Sebastian Meyer [ctb], Sietse Brouwer [ctb], Simon de Bernard [ctb], Sylvain Rousseau [ctb], Taiyun Wei [ctb], Thibaut Assus [ctb], Thibaut Lamadon [ctb], Thomas Leeper [ctb], Tim Mastny [ctb], Tom Torsney-Weir [ctb], Trevor Davis [ctb], Viktoras Veitas [ctb], Weicheng Zhu [ctb], Wush Wu [ctb], Zachary Foster [ctb], Zhian N. Kamvar [ctb] (ORCID: ), Posit Software, PBC [cph, fnd]", "Maintainer": "Yihui Xie ", "Repository": "CRAN" }, @@ -1763,159 +1630,6 @@ "Repository": "CRAN", "Encoding": "UTF-8" }, - "lattice": { - "Package": "lattice", - "Version": "0.22-7", - "Source": "Repository", - "Date": "2025-03-31", - "Priority": "recommended", - "Title": "Trellis Graphics for R", - "Authors@R": "c(person(\"Deepayan\", \"Sarkar\", role = c(\"aut\", \"cre\"), email = \"deepayan.sarkar@r-project.org\", comment = c(ORCID = \"0000-0003-4107-1553\")), person(\"Felix\", \"Andrews\", role = \"ctb\"), person(\"Kevin\", \"Wright\", role = \"ctb\", comment = \"documentation\"), person(\"Neil\", \"Klepeis\", role = \"ctb\"), person(\"Johan\", \"Larsson\", role = \"ctb\", comment = \"miscellaneous improvements\"), person(\"Zhijian (Jason)\", \"Wen\", role = \"cph\", comment = \"filled contour code\"), person(\"Paul\", \"Murrell\", role = \"ctb\", email = \"paul@stat.auckland.ac.nz\"), person(\"Stefan\", \"Eng\", role = \"ctb\", comment = \"violin plot improvements\"), person(\"Achim\", \"Zeileis\", role = \"ctb\", comment = \"modern colors\"), person(\"Alexandre\", \"Courtiol\", role = \"ctb\", comment = \"generics for larrows, lpolygon, lrect and lsegments\") )", - "Description": "A powerful and elegant high-level data visualization system inspired by Trellis graphics, with an emphasis on multivariate data. Lattice is sufficient for typical graphics needs, and is also flexible enough to handle most nonstandard requirements. See ?Lattice for an introduction.", - "Depends": [ - "R (>= 4.0.0)" - ], - "Suggests": [ - "KernSmooth", - "MASS", - "latticeExtra", - "colorspace" - ], - "Imports": [ - "grid", - "grDevices", - "graphics", - "stats", - "utils" - ], - "Enhances": [ - "chron", - "zoo" - ], - "LazyLoad": "yes", - "LazyData": "yes", - "License": "GPL (>= 2)", - "URL": "https://lattice.r-forge.r-project.org/", - "BugReports": "https://github.com/deepayan/lattice/issues", - "NeedsCompilation": "yes", - "Author": "Deepayan Sarkar [aut, cre] (), Felix Andrews [ctb], Kevin Wright [ctb] (documentation), Neil Klepeis [ctb], Johan Larsson [ctb] (miscellaneous improvements), Zhijian (Jason) Wen [cph] (filled contour code), Paul Murrell [ctb], Stefan Eng [ctb] (violin plot improvements), Achim Zeileis [ctb] (modern colors), Alexandre Courtiol [ctb] (generics for larrows, lpolygon, lrect and lsegments)", - "Maintainer": "Deepayan Sarkar ", - "Repository": "CRAN" - }, - "lazyeval": { - "Package": "lazyeval", - "Version": "0.2.2", - "Source": "Repository", - "Title": "Lazy (Non-Standard) Evaluation", - "Description": "An alternative approach to non-standard evaluation using formulas. Provides a full implementation of LISP style 'quasiquotation', making it easier to generate code with other code.", - "Authors@R": "c( person(\"Hadley\", \"Wickham\", ,\"hadley@rstudio.com\", c(\"aut\", \"cre\")), person(\"RStudio\", role = \"cph\") )", - "License": "GPL-3", - "LazyData": "true", - "Depends": [ - "R (>= 3.1.0)" - ], - "Suggests": [ - "knitr", - "rmarkdown (>= 0.2.65)", - "testthat", - "covr" - ], - "VignetteBuilder": "knitr", - "RoxygenNote": "6.1.1", - "NeedsCompilation": "yes", - "Author": "Hadley Wickham [aut, cre], RStudio [cph]", - "Maintainer": "Hadley Wickham ", - "Repository": "CRAN", - "Encoding": "UTF-8" - }, - "leaflet": { - "Package": "leaflet", - "Version": "2.2.3", - "Source": "Repository", - "Type": "Package", - "Title": "Create Interactive Web Maps with the JavaScript 'Leaflet' Library", - "Authors@R": "c( person(\"Joe\", \"Cheng\", , \"joe@posit.co\", role = \"aut\"), person(\"Barret\", \"Schloerke\", , \"barret@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0001-9986-114X\")), person(\"Bhaskar\", \"Karambelkar\", role = \"aut\"), person(\"Yihui\", \"Xie\", role = \"aut\"), person(\"Garrick\", \"Aden-Buie\", , \"garrick@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-7111-0077\")), person(\"Hadley\", \"Wickham\", role = \"ctb\"), person(\"Kenton\", \"Russell\", role = \"ctb\"), person(\"Kent\", \"Johnson\", role = \"ctb\"), person(\"Vladimir\", \"Agafonkin\", role = c(\"ctb\", \"cph\"), comment = \"Leaflet library\"), person(\"CloudMade\", role = \"cph\", comment = \"Leaflet library\"), person(\"Leaflet contributors\", role = \"ctb\", comment = \"Leaflet library\"), person(\"Brandon Copeland\", role = c(\"ctb\", \"cph\"), comment = \"leaflet-measure plugin\"), person(\"Joerg Dietrich\", role = c(\"ctb\", \"cph\"), comment = \"Leaflet.Terminator plugin\"), person(\"Benjamin Becquet\", role = c(\"ctb\", \"cph\"), comment = \"Leaflet.MagnifyingGlass plugin\"), person(\"Norkart AS\", role = c(\"ctb\", \"cph\"), comment = \"Leaflet.MiniMap plugin\"), person(\"L. Voogdt\", role = c(\"ctb\", \"cph\"), comment = \"Leaflet.awesome-markers plugin\"), person(\"Daniel Montague\", role = c(\"ctb\", \"cph\"), comment = \"Leaflet.EasyButton plugin\"), person(\"Kartena AB\", role = c(\"ctb\", \"cph\"), comment = \"Proj4Leaflet plugin\"), person(\"Robert Kajic\", role = c(\"ctb\", \"cph\"), comment = \"leaflet-locationfilter plugin\"), person(\"Mapbox\", role = c(\"ctb\", \"cph\"), comment = \"leaflet-omnivore plugin\"), person(\"Michael Bostock\", role = c(\"ctb\", \"cph\"), comment = \"topojson\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", - "Description": "Create and customize interactive maps using the 'Leaflet' JavaScript library and the 'htmlwidgets' package. These maps can be used directly from the R console, from 'RStudio', in Shiny applications and R Markdown documents.", - "License": "MIT + file LICENSE", - "URL": "https://rstudio.github.io/leaflet/, https://github.com/rstudio/leaflet", - "BugReports": "https://github.com/rstudio/leaflet/issues", - "Depends": [ - "R (>= 3.5)" - ], - "Imports": [ - "crosstalk", - "htmltools", - "htmlwidgets (>= 1.5.4)", - "jquerylib", - "leaflet.providers (>= 2.0.0)", - "magrittr", - "methods", - "png", - "raster (>= 3.6.3)", - "RColorBrewer", - "rlang", - "scales (>= 1.0.0)", - "sf (>= 0.9-6)", - "stats", - "viridisLite", - "xfun" - ], - "Suggests": [ - "knitr", - "maps", - "purrr", - "R6", - "RJSONIO", - "rmarkdown", - "s2", - "shiny (>= 1.0.0)", - "sp", - "terra", - "testthat (>= 3.0.0)" - ], - "Config/Needs/website": "dplyr, ncdf4, rnaturalearth, tidyverse/tidytemplate", - "Config/testthat/edition": "3", - "Encoding": "UTF-8", - "LazyData": "true", - "RoxygenNote": "7.3.2", - "NeedsCompilation": "no", - "Author": "Joe Cheng [aut], Barret Schloerke [aut] (ORCID: ), Bhaskar Karambelkar [aut], Yihui Xie [aut], Garrick Aden-Buie [aut, cre] (ORCID: ), Hadley Wickham [ctb], Kenton Russell [ctb], Kent Johnson [ctb], Vladimir Agafonkin [ctb, cph] (Leaflet library), CloudMade [cph] (Leaflet library), Leaflet contributors [ctb] (Leaflet library), Brandon Copeland [ctb, cph] (leaflet-measure plugin), Joerg Dietrich [ctb, cph] (Leaflet.Terminator plugin), Benjamin Becquet [ctb, cph] (Leaflet.MagnifyingGlass plugin), Norkart AS [ctb, cph] (Leaflet.MiniMap plugin), L. Voogdt [ctb, cph] (Leaflet.awesome-markers plugin), Daniel Montague [ctb, cph] (Leaflet.EasyButton plugin), Kartena AB [ctb, cph] (Proj4Leaflet plugin), Robert Kajic [ctb, cph] (leaflet-locationfilter plugin), Mapbox [ctb, cph] (leaflet-omnivore plugin), Michael Bostock [ctb, cph] (topojson), Posit Software, PBC [cph, fnd]", - "Maintainer": "Garrick Aden-Buie ", - "Repository": "CRAN" - }, - "leaflet.providers": { - "Package": "leaflet.providers", - "Version": "2.0.0", - "Source": "Repository", - "Type": "Package", - "Title": "Leaflet Providers", - "Authors@R": "c( person(\"Leslie\", \"Huang\", , \"lesliehuang@nyu.edu\", role = \"aut\"), person(\"Barret\", \"Schloerke\", , \"barret@posit.co\", role = c(\"ctb\", \"cre\"), comment = c(ORCID = \"0000-0001-9986-114X\")), person(\"Leaflet Providers contributors\", role = c(\"ctb\", \"cph\"), comment = \"Leaflet Providers plugin\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", - "Description": "Contains third-party map tile provider information from 'Leaflet.js', , to be used with the 'leaflet' R package. Additionally, 'leaflet.providers' enables users to retrieve up-to-date provider information between package updates.", - "License": "BSD_2_clause + file LICENSE", - "URL": "https://rstudio.github.io/leaflet.providers/, https://github.com/rstudio/leaflet.providers", - "BugReports": "https://github.com/rstudio/leaflet.providers/issues", - "Depends": [ - "R (>= 2.10)" - ], - "Imports": [ - "htmltools" - ], - "Suggests": [ - "jsonlite", - "testthat (>= 3.0.0)", - "V8" - ], - "Config/Needs/website": "tidyverse/tidytemplate", - "Config/testthat/edition": "3", - "Encoding": "UTF-8", - "Language": "en-US", - "RoxygenNote": "7.2.3", - "Collate": "'providers_data.R' 'get_current_providers.R' 'leaflet.providers-package.R' 'zzz.R'", - "NeedsCompilation": "no", - "Author": "Leslie Huang [aut], Barret Schloerke [ctb, cre] (), Leaflet Providers contributors [ctb, cph] (Leaflet Providers plugin), Posit Software, PBC [cph, fnd]", - "Maintainer": "Barret Schloerke ", - "Repository": "CRAN" - }, "lifecycle": { "Package": "lifecycle", "Version": "1.0.4", @@ -2003,6 +1717,54 @@ "Author": "Vitalie Spinu [aut, cre], Garrett Grolemund [aut], Hadley Wickham [aut], Davis Vaughan [ctb], Ian Lyttle [ctb], Imanuel Costigan [ctb], Jason Law [ctb], Doug Mitarotonda [ctb], Joseph Larmarange [ctb], Jonathan Boiser [ctb], Chel Hee Lee [ctb]", "Repository": "CRAN" }, + "magick": { + "Package": "magick", + "Version": "2.9.0", + "Source": "Repository", + "Type": "Package", + "Title": "Advanced Graphics and Image-Processing in R", + "Authors@R": "person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroenooms@gmail.com\", comment = c(ORCID = \"0000-0002-4035-0289\"))", + "Description": "Bindings to 'ImageMagick': the most comprehensive open-source image processing library available. Supports many common formats (png, jpeg, tiff, pdf, etc) and manipulations (rotate, scale, crop, trim, flip, blur, etc). All operations are vectorized via the Magick++ STL meaning they operate either on a single frame or a series of frames for working with layers, collages, or animation. In RStudio images are automatically previewed when printed to the console, resulting in an interactive editing environment. Also includes a graphics device for creating drawing onto images using pixel coordinates.", + "License": "MIT + file LICENSE", + "URL": "https://docs.ropensci.org/magick/ https://ropensci.r-universe.dev/magick", + "BugReports": "https://github.com/ropensci/magick/issues", + "SystemRequirements": "ImageMagick++: ImageMagick-c++-devel (rpm) or libmagick++-dev (deb)", + "VignetteBuilder": "knitr", + "Depends": [ + "R (>= 4.1.0)" + ], + "Imports": [ + "Rcpp (>= 0.12.12)", + "magrittr", + "curl" + ], + "LinkingTo": [ + "Rcpp" + ], + "Suggests": [ + "av", + "spelling", + "jsonlite", + "methods", + "knitr", + "rmarkdown", + "rsvg", + "webp", + "pdftools", + "ggplot2", + "gapminder", + "IRdisplay", + "tesseract", + "gifski" + ], + "Encoding": "UTF-8", + "RoxygenNote": "7.3.2", + "Language": "en-US", + "NeedsCompilation": "yes", + "Author": "Jeroen Ooms [aut, cre] (ORCID: )", + "Maintainer": "Jeroen Ooms ", + "Repository": "CRAN" + }, "magrittr": { "Package": "magrittr", "Version": "2.0.4", @@ -2034,37 +1796,6 @@ "Maintainer": "Lionel Henry ", "Repository": "CRAN" }, - "maps": { - "Package": "maps", - "Version": "3.4.3", - "Source": "Repository", - "Title": "Draw Geographical Maps", - "Date": "2025-05-15", - "Description": "Display of maps. Projection code and larger maps are in separate packages ('mapproj' and 'mapdata').", - "Depends": [ - "R (>= 3.5.0)" - ], - "Imports": [ - "graphics", - "utils" - ], - "LazyData": "yes", - "Suggests": [ - "mapproj (>= 1.2-0)", - "mapdata (>= 2.3.0)", - "sf", - "rnaturalearth" - ], - "License": "GPL-2", - "URL": "https://github.com/adeckmyn/maps", - "BugReports": "https://github.com/adeckmyn/maps/issues", - "Authors@R": "c(person(given = c(\"Richard\", \"A.\"), family = \"Becker\", role = \"aut\", comment= \"Original S code\"), person(given = c(\"Allan\", \"R.\"), family = \"Wilks\", role = \"aut\", comment= \"Original S code\"), person(given = \"Ray\", family = \"Brownrigg\", role = c(\"trl\", \"aut\"), comment= \"R version\"), person(given = c(\"Thomas\", \"P.\"), family = \"Minka\", role = \"aut\", comment= \"Enhancements\"), person(given = \"Alex\", family = \"Deckmyn\", role = c(\"aut\", \"cre\"), comment= c(ORCID=\"0009-0002-2010-8310\"), email = \"alex.deckmyn@meteo.be\"))", - "NeedsCompilation": "yes", - "Repository": "CRAN", - "Author": "Richard A. Becker [aut] (Original S code), Allan R. Wilks [aut] (Original S code), Ray Brownrigg [trl, aut] (R version), Thomas P. Minka [aut] (Enhancements), Alex Deckmyn [aut, cre] (ORCID: )", - "Maintainer": "Alex Deckmyn ", - "Encoding": "UTF-8" - }, "memoise": { "Package": "memoise", "Version": "2.0.1", @@ -2116,42 +1847,81 @@ "Maintainer": "Yihui Xie ", "Repository": "CRAN" }, - "networkD3": { - "Package": "networkD3", - "Version": "0.4.1", + "openSkies": { + "Package": "openSkies", + "Version": "1.2.2", "Source": "Repository", "Type": "Package", - "Title": "D3 JavaScript Network Graphs from R", - "Description": "Creates 'D3' 'JavaScript' network, tree, dendrogram, and Sankey graphs from 'R'.", - "Date": "2025-04-14", - "Authors@R": "c( person(\"J.J.\", \"Allaire\", role = \"aut\"), person(\"Peter\", \"Ellis\", role = \"ctb\"), person(\"Christopher\", \"Gandrud\", email = \"christopher.gandrud@gmail.com\", role = c(\"aut\", \"cre\")), person(\"Kevin\", \"Kuo\", role = \"ctb\"), person(\"B.W.\", \"Lewis\", role = \"ctb\"), person(\"Jonathan\", \"Owen\", role = \"ctb\"), person(\"Kenton\", \"Russell\", role = \"aut\"), person(\"Jennifer\",\"Rogers\", role = \"ctb\"), person(\"Charles\", \"Sese\", role = \"ctb\"), person(\"CJ\", \"Yetman\", email = \"cj@cjyetman.com\", role = \"aut\") )", - "URL": "https://christophergandrud.github.io/networkD3/, https://github.com/christophergandrud/networkD3", - "BugReports": "https://github.com/christophergandrud/networkD3/issues", - "License": "GPL (>= 3)", + "Title": "Retrieval, Analysis and Visualization of Air Traffic Data", + "Date": "2025-08-20", + "Authors@R": "c( person(\"Rafael\", \"Ayala\", email = \"rafaelayalahernandez@gmail.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-9332-4623\")), person(\"Daniel\", \"Ayala\", email = \"dayala1@us.es\", role = \"aut\", comment = c(ORCID = \"0000-0003-2095-1009\")), person(\"David\", \"Ruiz\", email = \"druiz@us.es\", role = \"aut\", comment = c(ORCID = \"0000-0003-4460-5493\")), person(\"Aleix\", \"Sellés\", role = \"aut\"), person(\"Lara\", \"Selles Vidal\", email = \"lara.selles@oist.jp\", role = \"aut\", comment = c(ORCID = \"0000-0003-2537-6824\")))", + "Description": "Provides functionalities and data structures to retrieve, analyze and visualize aviation data. It includes a client interface to the 'OpenSky' API . It allows retrieval of flight information, as well as aircraft state vectors.", + "Acknowledgements": "The development of this software is supported by the Spanish Ministry of Science and Innovation (grant code PID2019-105471RB-I00) and the Regional Government of Andalusia (grant code P18-RT-1060).", + "License": "CC BY-NC 4.0", "Depends": [ - "R (>= 3.0.0)" + "grid" ], "Imports": [ - "data.tree", - "htmlwidgets (>= 0.3.2)", - "igraph", - "jsonlite", - "magrittr" + "httr", + "ssh", + "xml2", + "ggmap", + "ggplot2", + "magick", + "utils", + "stats", + "R6", + "dbscan", + "cluster", + "DBI", + "RPresto" ], "Suggests": [ - "htmltools (>= 0.2.6)", - "tibble" - ], - "Encoding": "UTF-8", - "Enhances": [ "knitr", - "shiny" + "BiocStyle", + "RUnit", + "rmarkdown", + "markdown" ], - "LazyData": "true", - "RoxygenNote": "7.3.2", + "VignetteBuilder": "knitr", + "BugReports": "https://github.com/Rafael-Ayala/openSkies/issues", "NeedsCompilation": "no", - "Author": "J.J. Allaire [aut], Peter Ellis [ctb], Christopher Gandrud [aut, cre], Kevin Kuo [ctb], B.W. Lewis [ctb], Jonathan Owen [ctb], Kenton Russell [aut], Jennifer Rogers [ctb], Charles Sese [ctb], CJ Yetman [aut]", - "Maintainer": "Christopher Gandrud ", + "Encoding": "UTF-8", + "Repository": "CRAN", + "Author": "Rafael Ayala [aut, cre] (ORCID: ), Daniel Ayala [aut] (ORCID: ), David Ruiz [aut] (ORCID: ), Aleix Sellés [aut], Lara Selles Vidal [aut] (ORCID: )", + "Maintainer": "Rafael Ayala " + }, + "openssl": { + "Package": "openssl", + "Version": "2.3.4", + "Source": "Repository", + "Type": "Package", + "Title": "Toolkit for Encryption, Signatures and Certificates Based on OpenSSL", + "Authors@R": "c(person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroenooms@gmail.com\", comment = c(ORCID = \"0000-0002-4035-0289\")), person(\"Oliver\", \"Keyes\", role = \"ctb\"))", + "Description": "Bindings to OpenSSL libssl and libcrypto, plus custom SSH key parsers. Supports RSA, DSA and EC curves P-256, P-384, P-521, and curve25519. Cryptographic signatures can either be created and verified manually or via x509 certificates. AES can be used in cbc, ctr or gcm mode for symmetric encryption; RSA for asymmetric (public key) encryption or EC for Diffie Hellman. High-level envelope functions combine RSA and AES for encrypting arbitrary sized data. Other utilities include key generators, hash functions (md5, sha1, sha256, etc), base64 encoder, a secure random number generator, and 'bignum' math methods for manually performing crypto calculations on large multibyte integers.", + "License": "MIT + file LICENSE", + "URL": "https://jeroen.r-universe.dev/openssl", + "BugReports": "https://github.com/jeroen/openssl/issues", + "SystemRequirements": "OpenSSL >= 1.0.2", + "VignetteBuilder": "knitr", + "Imports": [ + "askpass" + ], + "Suggests": [ + "curl", + "testthat (>= 2.1.0)", + "digest", + "knitr", + "rmarkdown", + "jsonlite", + "jose", + "sodium" + ], + "RoxygenNote": "7.3.2", + "Encoding": "UTF-8", + "NeedsCompilation": "yes", + "Author": "Jeroen Ooms [aut, cre] (ORCID: ), Oliver Keyes [ctb]", + "Maintainer": "Jeroen Ooms ", "Repository": "CRAN" }, "pillar": { @@ -2348,31 +2118,54 @@ "Maintainer": "Gábor Csárdi ", "Repository": "CRAN" }, - "proxy": { - "Package": "proxy", - "Version": "0.4-27", + "purrr": { + "Package": "purrr", + "Version": "1.2.0", "Source": "Repository", - "Type": "Package", - "Title": "Distance and Similarity Measures", - "Authors@R": "c(person(given = \"David\", family = \"Meyer\", role = c(\"aut\", \"cre\"), email = \"David.Meyer@R-project.org\"), person(given = \"Christian\", family = \"Buchta\", role = \"aut\"))", - "Description": "Provides an extensible framework for the efficient calculation of auto- and cross-proximities, along with implementations of the most popular ones.", + "Title": "Functional Programming Tools", + "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Lionel\", \"Henry\", , \"lionel@posit.co\", role = \"aut\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"https://ror.org/03wc8by49\")) )", + "Description": "A complete and consistent functional programming toolkit for R.", + "License": "MIT + file LICENSE", + "URL": "https://purrr.tidyverse.org/, https://github.com/tidyverse/purrr", + "BugReports": "https://github.com/tidyverse/purrr/issues", "Depends": [ - "R (>= 3.4.0)" + "R (>= 4.1)" ], "Imports": [ - "stats", - "utils" + "cli (>= 3.6.1)", + "lifecycle (>= 1.0.3)", + "magrittr (>= 1.5.0)", + "rlang (>= 1.1.1)", + "vctrs (>= 0.6.3)" ], "Suggests": [ - "cba" + "carrier (>= 0.3.0)", + "covr", + "dplyr (>= 0.7.8)", + "httr", + "knitr", + "lubridate", + "mirai (>= 2.5.1)", + "rmarkdown", + "testthat (>= 3.0.0)", + "tibble", + "tidyselect" ], - "Collate": "registry.R database.R dist.R similarities.R dissimilarities.R util.R seal.R", - "License": "GPL-2", + "LinkingTo": [ + "cli" + ], + "VignetteBuilder": "knitr", + "Biarch": "true", + "Config/build/compilation-database": "true", + "Config/Needs/website": "tidyverse/tidytemplate, tidyr", + "Config/testthat/edition": "3", + "Config/testthat/parallel": "TRUE", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.3", "NeedsCompilation": "yes", - "Author": "David Meyer [aut, cre], Christian Buchta [aut]", - "Maintainer": "David Meyer ", - "Repository": "CRAN", - "Encoding": "UTF-8" + "Author": "Hadley Wickham [aut, cre] (ORCID: ), Lionel Henry [aut], Posit Software, PBC [cph, fnd] (ROR: )", + "Maintainer": "Hadley Wickham ", + "Repository": "CRAN" }, "rappdirs": { "Package": "rappdirs", @@ -2403,105 +2196,6 @@ "Maintainer": "Hadley Wickham ", "Repository": "CRAN" }, - "raster": { - "Package": "raster", - "Version": "3.6-32", - "Source": "Repository", - "Type": "Package", - "Title": "Geographic Data Analysis and Modeling", - "Date": "2025-03-27", - "Imports": [ - "Rcpp", - "methods", - "terra (>= 1.8-5)" - ], - "LinkingTo": [ - "Rcpp" - ], - "Depends": [ - "sp (>= 1.4-5)", - "R (>= 3.5.0)" - ], - "Suggests": [ - "ncdf4", - "igraph", - "tcltk", - "parallel", - "rasterVis", - "MASS", - "sf", - "tinytest", - "gstat", - "fields", - "exactextractr" - ], - "Description": "Reading, writing, manipulating, analyzing and modeling of spatial data. This package has been superseded by the \"terra\" package .", - "License": "GPL (>= 3)", - "URL": "https://rspatial.org/raster", - "BugReports": "https://github.com/rspatial/raster/issues/", - "Authors@R": "c( person(\"Robert J.\", \"Hijmans\", role = c(\"cre\", \"aut\"), email = \"r.hijmans@gmail.com\", comment = c(ORCID = \"0000-0001-5872-2872\")), person(\"Jacob\", \"van Etten\", role = \"ctb\"), person(\"Michael\", \"Sumner\", role = \"ctb\"), person(\"Joe\", \"Cheng\", role = \"ctb\"), person(\"Dan\", \"Baston\", role = \"ctb\"), person(\"Andrew\", \"Bevan\", role = \"ctb\"), person(\"Roger\", \"Bivand\", role = \"ctb\"), person(\"Lorenzo\", \"Busetto\", role = \"ctb\"), person(\"Mort\", \"Canty\", role = \"ctb\"), person(\"Ben\", \"Fasoli\", role = \"ctb\"), person(\"David\", \"Forrest\", role = \"ctb\"), person(\"Aniruddha\", \"Ghosh\", role = \"ctb\"), person(\"Duncan\", \"Golicher\", role = \"ctb\"), person(\"Josh\", \"Gray\", role = \"ctb\"), person(\"Jonathan A.\", \"Greenberg\", role = \"ctb\"), person(\"Paul\", \"Hiemstra\", role = \"ctb\"), person(\"Kassel\", \"Hingee\", role = \"ctb\"), person(\"Alex\", \"Ilich\", role = \"ctb\"), person(\"Institute for Mathematics Applied Geosciences\", role=\"cph\"), person(\"Charles\", \"Karney\", role = \"ctb\"), person(\"Matteo\", \"Mattiuzzi\", role = \"ctb\"), person(\"Steven\", \"Mosher\", role = \"ctb\"), person(\"Babak\", \"Naimi\", role = \"ctb\"),\t person(\"Jakub\", \"Nowosad\", role = \"ctb\"), person(\"Edzer\", \"Pebesma\", role = \"ctb\"), person(\"Oscar\", \"Perpinan Lamigueiro\", role = \"ctb\"), person(\"Etienne B.\", \"Racine\", role = \"ctb\"), person(\"Barry\", \"Rowlingson\", role = \"ctb\"), person(\"Ashton\", \"Shortridge\", role = \"ctb\"), person(\"Bill\", \"Venables\", role = \"ctb\"), person(\"Rafael\", \"Wueest\", role = \"ctb\") )", - "NeedsCompilation": "yes", - "Author": "Robert J. Hijmans [cre, aut] (), Jacob van Etten [ctb], Michael Sumner [ctb], Joe Cheng [ctb], Dan Baston [ctb], Andrew Bevan [ctb], Roger Bivand [ctb], Lorenzo Busetto [ctb], Mort Canty [ctb], Ben Fasoli [ctb], David Forrest [ctb], Aniruddha Ghosh [ctb], Duncan Golicher [ctb], Josh Gray [ctb], Jonathan A. Greenberg [ctb], Paul Hiemstra [ctb], Kassel Hingee [ctb], Alex Ilich [ctb], Institute for Mathematics Applied Geosciences [cph], Charles Karney [ctb], Matteo Mattiuzzi [ctb], Steven Mosher [ctb], Babak Naimi [ctb], Jakub Nowosad [ctb], Edzer Pebesma [ctb], Oscar Perpinan Lamigueiro [ctb], Etienne B. Racine [ctb], Barry Rowlingson [ctb], Ashton Shortridge [ctb], Bill Venables [ctb], Rafael Wueest [ctb]", - "Maintainer": "Robert J. 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High-performance constructors and exporters provide high compatibility with existing spatial packages, transformers construct new geometries from existing geometries, predicates provide a means to select geometries based on spatial relationships, and accessors extract information about geometries.", - "License": "Apache License (== 2.0)", - "Encoding": "UTF-8", - "LazyData": "true", - "RoxygenNote": "7.3.2", - "SystemRequirements": "cmake, OpenSSL >= 1.0.1, Abseil >= 20230802.0", - "LinkingTo": [ - "Rcpp", - "wk" - ], - "Imports": [ - "Rcpp", - "wk (>= 0.6.0)" - ], - "Suggests": [ - "bit64", - "testthat (>= 3.0.0)", - "vctrs" - ], - "URL": "https://r-spatial.github.io/s2/, https://github.com/r-spatial/s2, http://s2geometry.io/", - "BugReports": "https://github.com/r-spatial/s2/issues", - "Depends": [ - "R (>= 3.0.0)" - ], - "Config/testthat/edition": "3", - "NeedsCompilation": "yes", - "Author": "Dewey Dunnington [aut] (ORCID: ), Edzer Pebesma [aut, cre] (ORCID: ), Ege Rubak [aut], Jeroen Ooms [ctb] (configure script), Google, Inc. 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Binds to 'GDAL' for reading and writing data, to 'GEOS' for geometrical operations, and to 'PROJ' for projection conversions and datum transformations. 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Differences with other sparse matrix packages are: (1) we only support (essentially) one sparse matrix format, (2) based on transparent and simple structure(s), (3) tailored for MCMC calculations within G(M)RF. (4) and it is fast and scalable (with the extension package spam64). 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George [ctb] (Fortran Cholesky routines), Lehoucq B. Rich [ctb] (ARPACK), Maschhoff Kristi [ctb] (ARPACK), Sorensen C. Danny [ctb] (ARPACK), Yang Chao [ctb] (ARPACK)", - "Maintainer": "Reinhard Furrer ", - "Repository": "CRAN", - "Encoding": "UTF-8" + "Author": "Jeroen Ooms [aut, cre] ()", + "Maintainer": "Jeroen Ooms ", + "Repository": "CRAN" + }, + "stringdist": { + "Package": "stringdist", + "Version": "0.9.15", + "Source": "Repository", + "Maintainer": "Mark van der Loo ", + "License": "GPL-3", + "Title": "Approximate String Matching, Fuzzy Text Search, and String Distance Functions", + "Type": "Package", + "LazyLoad": "yes", + "Authors@R": "c( person(\"Mark\", \"van der Loo\", role=c(\"aut\",\"cre\") , email=\"mark.vanderloo@gmail.com\" , comment= c(ORCID=\"0000-0002-9807-4686\")) , person(\"Jan\", \"van der Laan\", role=\"ctb\") , person(\"R Core Team\",\"\" , role=\"ctb\") , person(\"Nick\",\"Logan\" , role=\"ctb\") , person(\"Chris\",\"Muir\" , role=\"ctb\") , person(\"Johannes\", \"Gruber\" , role=\"ctb\") , person(\"Brian\",\"Ripley\" , role=\"ctb\"))", + "Description": "Implements an approximate string matching version of R's native 'match' function. Also offers fuzzy text search based on various string distance measures. Can calculate various string distances based on edits (Damerau-Levenshtein, Hamming, Levenshtein, optimal sting alignment), qgrams (q- gram, cosine, jaccard distance) or heuristic metrics (Jaro, Jaro-Winkler). An implementation of soundex is provided as well. Distances can be computed between character vectors while taking proper care of encoding or between integer vectors representing generic sequences. This package is built for speed and runs in parallel by using 'openMP'. An API for C or C++ is exposed as well. Reference: MPJ van der Loo (2014) .", + "Depends": [ + "R (>= 2.15.3)" + ], + "URL": "https://github.com/markvanderloo/stringdist", + "BugReports": "https://github.com/markvanderloo/stringdist/issues", + "Suggests": [ + "tinytest" + ], + "Imports": [ + "parallel" + ], + "Encoding": "UTF-8", + "RoxygenNote": "7.3.2", + "NeedsCompilation": "yes", + "Author": "Mark van der Loo [aut, cre] (), Jan van der Laan [ctb], R Core Team [ctb], Nick Logan [ctb], Chris Muir [ctb], Johannes Gruber [ctb], Brian Ripley [ctb]", + "Repository": "CRAN" }, "stringi": { "Package": "stringi", @@ -3044,7 +2530,7 @@ }, "stringr": { "Package": "stringr", - "Version": "1.5.2", + "Version": "1.6.0", "Source": "Repository", "Title": "Simple, Consistent Wrappers for Common String Operations", "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\", \"cph\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", @@ -3053,7 +2539,7 @@ "URL": "https://stringr.tidyverse.org, https://github.com/tidyverse/stringr", "BugReports": "https://github.com/tidyverse/stringr/issues", "Depends": [ - "R (>= 3.6)" + "R (>= 4.1.0)" ], "Imports": [ "cli", @@ -3077,54 +2563,38 @@ ], "VignetteBuilder": "knitr", "Config/Needs/website": "tidyverse/tidytemplate", + "Config/potools/style": "explicit", "Config/testthat/edition": "3", "Encoding": "UTF-8", "LazyData": "true", - "RoxygenNote": "7.3.2", + "RoxygenNote": "7.3.3", "NeedsCompilation": "no", "Author": "Hadley Wickham [aut, cre, cph], Posit Software, PBC [cph, fnd]", "Maintainer": "Hadley Wickham ", "Repository": "CRAN" }, - "terra": { - "Package": "terra", - "Version": "1.8-70", + "sys": { + "Package": "sys", + "Version": "3.4.3", "Source": "Repository", "Type": "Package", - "Title": "Spatial Data Analysis", - "Date": "2025-09-26", - "Depends": [ - "R (>= 3.5.0)" - ], - "Suggests": [ - "parallel", - "tinytest", - "ncdf4", - "sf (>= 0.9-8)", - "deldir", - "XML", - "leaflet (>= 2.2.1)", - "htmlwidgets" - ], - "LinkingTo": [ - "Rcpp" - ], - "Imports": [ - "methods", - "Rcpp (>= 1.0-10)" - ], - "SystemRequirements": "C++17, GDAL (>= 2.2.3), GEOS (>= 3.4.0), PROJ (>= 4.9.3), TBB, sqlite3", + "Title": "Powerful and Reliable Tools for Running System Commands in R", + "Authors@R": "c(person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroenooms@gmail.com\", comment = c(ORCID = \"0000-0002-4035-0289\")), person(\"Gábor\", \"Csárdi\", , \"csardi.gabor@gmail.com\", role = \"ctb\"))", + "Description": "Drop-in replacements for the base system2() function with fine control and consistent behavior across platforms. Supports clean interruption, timeout, background tasks, and streaming STDIN / STDOUT / STDERR over binary or text connections. Arguments on Windows automatically get encoded and quoted to work on different locales.", + "License": "MIT + file LICENSE", + "URL": "https://jeroen.r-universe.dev/sys", + "BugReports": "https://github.com/jeroen/sys/issues", "Encoding": "UTF-8", + "RoxygenNote": "7.1.1", + "Suggests": [ + "unix (>= 1.4)", + "spelling", + "testthat" + ], "Language": "en-US", - "Maintainer": "Robert J. Hijmans ", - "Description": "Methods for spatial data analysis with vector (points, lines, polygons) and raster (grid) data. Methods for vector data include geometric operations such as intersect and buffer. Raster methods include local, focal, global, zonal and geometric operations. The predict and interpolate methods facilitate the use of regression type (interpolation, machine learning) models for spatial prediction, including with satellite remote sensing data. Processing of very large files is supported. See the manual and tutorials on to get started. 'terra' replaces the 'raster' package ('terra' can do more, and it is faster and easier to use).", - "License": "GPL (>= 3)", - "URL": "https://rspatial.org/, https://rspatial.github.io/terra/", - "BugReports": "https://github.com/rspatial/terra/issues/", - "LazyLoad": "yes", - "Authors@R": "c( person(\"Robert J.\", \"Hijmans\", role=c(\"cre\", \"aut\"), email=\"r.hijmans@gmail.com\", comment=c(ORCID=\"0000-0001-5872-2872\")),\t\t\t person(\"Márcia\", \"Barbosa\", role=\"ctb\", comment=c(ORCID=\"0000-0001-8972-7713\")), person(\"Roger\", \"Bivand\", role=\"ctb\", comment=c(ORCID=\"0000-0003-2392-6140\")), person(\"Andrew\", \"Brown\", role=\"ctb\", comment=c(ORCID=\"0000-0002-4565-533X\")), person(\"Michael\", \"Chirico\", role=\"ctb\", comment=c(ORCID=\"0000-0003-0787-087X\")), person(\"Emanuele\", \"Cordano\", role=\"ctb\",comment=c(ORCID=\"0000-0002-3508-5898\")), person(\"Krzysztof\", \"Dyba\", role=\"ctb\", comment=c(ORCID=\"0000-0002-8614-3816\")), person(\"Edzer\", \"Pebesma\", role=\"ctb\", comment=c(ORCID=\"0000-0001-8049-7069\")), person(\"Barry\", \"Rowlingson\", role=\"ctb\", comment=c(ORCID=\"0000-0002-8586-6625\")), person(\"Michael D.\", \"Sumner\", role=\"ctb\", comment=c(ORCID=\"0000-0002-2471-7511\")))", "NeedsCompilation": "yes", - "Author": "Robert J. Hijmans [cre, aut] (ORCID: ), Márcia Barbosa [ctb] (ORCID: ), Roger Bivand [ctb] (ORCID: ), Andrew Brown [ctb] (ORCID: ), Michael Chirico [ctb] (ORCID: ), Emanuele Cordano [ctb] (ORCID: ), Krzysztof Dyba [ctb] (ORCID: ), Edzer Pebesma [ctb] (ORCID: ), Barry Rowlingson [ctb] (ORCID: ), Michael D. Sumner [ctb] (ORCID: )", + "Author": "Jeroen Ooms [aut, cre] (), Gábor Csárdi [ctb]", + "Maintainer": "Jeroen Ooms ", "Repository": "CRAN" }, "tibble": { @@ -3191,6 +2661,57 @@ "Maintainer": "Kirill Müller ", "Repository": "CRAN" }, + "tidyr": { + "Package": "tidyr", + "Version": "1.3.2", + "Source": "Repository", + "Title": "Tidy Messy Data", + "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\")), person(\"Davis\", \"Vaughan\", , \"davis@posit.co\", role = \"aut\"), person(\"Maximilian\", \"Girlich\", role = \"aut\"), person(\"Kevin\", \"Ushey\", , \"kevin@posit.co\", role = \"ctb\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", + "Description": "Tools to help to create tidy data, where each column is a variable, each row is an observation, and each cell contains a single value. 'tidyr' contains tools for changing the shape (pivoting) and hierarchy (nesting and 'unnesting') of a dataset, turning deeply nested lists into rectangular data frames ('rectangling'), and extracting values out of string columns. It also includes tools for working with missing values (both implicit and explicit).", + "License": "MIT + file LICENSE", + "URL": "https://tidyr.tidyverse.org, https://github.com/tidyverse/tidyr", + "BugReports": "https://github.com/tidyverse/tidyr/issues", + "Depends": [ + "R (>= 4.1.0)" + ], + "Imports": [ + "cli (>= 3.4.1)", + "dplyr (>= 1.1.0)", + "glue", + "lifecycle (>= 1.0.3)", + "magrittr", + "purrr (>= 1.0.1)", + "rlang (>= 1.1.1)", + "stringr (>= 1.5.0)", + "tibble (>= 2.1.1)", + "tidyselect (>= 1.2.1)", + "utils", + "vctrs (>= 0.5.2)" + ], + "Suggests": [ + "covr", + "data.table", + "knitr", + "readr", + "repurrrsive (>= 1.1.0)", + "rmarkdown", + "testthat (>= 3.0.0)" + ], + "LinkingTo": [ + "cpp11 (>= 0.4.0)" + ], + "VignetteBuilder": "knitr", + "Config/build/compilation-database": "true", + "Config/Needs/website": "tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Encoding": "UTF-8", + "LazyData": "true", + "RoxygenNote": "7.3.3", + "NeedsCompilation": "yes", + "Author": "Hadley Wickham [aut, cre], Davis Vaughan [aut], Maximilian Girlich [aut], Kevin Ushey [ctb], Posit Software, PBC [cph, fnd]", + "Maintainer": "Hadley Wickham ", + "Repository": "CRAN" + }, "tidyselect": { "Package": "tidyselect", "Version": "1.2.1", @@ -3264,7 +2785,7 @@ }, "tinytex": { "Package": "tinytex", - "Version": "0.57", + "Version": "0.58", "Source": "Repository", "Type": "Package", "Title": "Helper Functions to Install and Maintain TeX Live, and Compile LaTeX Documents", @@ -3281,84 +2802,10 @@ "URL": "https://github.com/rstudio/tinytex", "BugReports": "https://github.com/rstudio/tinytex/issues", "Encoding": "UTF-8", - "RoxygenNote": "7.3.2", - "NeedsCompilation": "no", - "Author": "Yihui Xie [aut, cre, cph] (), Posit Software, PBC [cph, fnd], Christophe Dervieux [ctb] (), Devon Ryan [ctb] (), Ethan Heinzen [ctb], Fernando Cagua [ctb]", - "Maintainer": "Yihui Xie ", - "Repository": "CRAN" - }, - "tzdb": { - "Package": "tzdb", - "Version": "0.5.0", - "Source": "Repository", - "Title": "Time Zone Database Information", - "Authors@R": "c( person(\"Davis\", \"Vaughan\", , \"davis@posit.co\", role = c(\"aut\", \"cre\")), person(\"Howard\", \"Hinnant\", role = \"cph\", comment = \"Author of the included date library\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", - "Description": "Provides an up-to-date copy of the Internet Assigned Numbers Authority (IANA) Time Zone Database. It is updated periodically to reflect changes made by political bodies to time zone boundaries, UTC offsets, and daylight saving time rules. Additionally, this package provides a C++ interface for working with the 'date' library. 'date' provides comprehensive support for working with dates and date-times, which this package exposes to make it easier for other R packages to utilize. Headers are provided for calendar specific calculations, along with a limited interface for time zone manipulations.", - "License": "MIT + file LICENSE", - "URL": "https://tzdb.r-lib.org, https://github.com/r-lib/tzdb", - "BugReports": "https://github.com/r-lib/tzdb/issues", - "Depends": [ - "R (>= 4.0.0)" - ], - "Suggests": [ - "covr", - "testthat (>= 3.0.0)" - ], - "LinkingTo": [ - "cpp11 (>= 0.5.2)" - ], - "Biarch": "yes", - "Config/Needs/website": "tidyverse/tidytemplate", - "Config/testthat/edition": "3", - "Encoding": "UTF-8", - "RoxygenNote": "7.3.2", - "NeedsCompilation": "yes", - "Author": "Davis Vaughan [aut, cre], Howard Hinnant [cph] (Author of the included date library), Posit Software, PBC [cph, fnd]", - "Maintainer": "Davis Vaughan ", - "Repository": "CRAN" - }, - "units": { - "Package": "units", - "Version": "1.0-0", - "Source": "Repository", - "Title": "Measurement Units for R Vectors", - "Authors@R": "c(person(\"Edzer\", \"Pebesma\", role = c(\"aut\", \"cre\"), email = \"edzer.pebesma@uni-muenster.de\", comment = c(ORCID = \"0000-0001-8049-7069\")), person(\"Thomas\", \"Mailund\", role = \"aut\", email = \"mailund@birc.au.dk\"), person(\"Tomasz\", \"Kalinowski\", role = \"aut\"), person(\"James\", \"Hiebert\", role = \"ctb\"), person(\"Iñaki\", \"Ucar\", role = \"aut\", email = \"iucar@fedoraproject.org\", comment = c(ORCID = \"0000-0001-6403-5550\")), person(\"Thomas Lin\", \"Pedersen\", role = \"ctb\") )", - "Depends": [ - "R (>= 3.5.0)" - ], - "Imports": [ - "Rcpp" - ], - "LinkingTo": [ - "Rcpp (>= 0.12.10)" - ], - "Suggests": [ - "NISTunits", - "measurements", - "xml2", - "magrittr", - "pillar (>= 1.3.0)", - "dplyr (>= 1.0.0)", - "vctrs (>= 0.3.1)", - "ggplot2 (> 3.2.1)", - "testthat (>= 3.0.0)", - "vdiffr", - "knitr", - "rvest", - "rmarkdown" - ], - "VignetteBuilder": "knitr", - "Description": "Support for measurement units in R vectors, matrices and arrays: automatic propagation, conversion, derivation and simplification of units; raising errors in case of unit incompatibility. Compatible with the POSIXct, Date and difftime classes. Uses the UNIDATA udunits library and unit database for unit compatibility checking and conversion. Documentation about 'units' is provided in the paper by Pebesma, Mailund & Hiebert (2016, ), included in this package as a vignette; see 'citation(\"units\")' for details.", - "SystemRequirements": "udunits-2", - "License": "GPL-2", - "URL": "https://r-quantities.github.io/units/, https://github.com/r-quantities/units", - "BugReports": "https://github.com/r-quantities/units/issues", "RoxygenNote": "7.3.3", - "Encoding": "UTF-8", - "Config/testthat/edition": "3", - "NeedsCompilation": "yes", - "Author": "Edzer Pebesma [aut, cre] (ORCID: ), Thomas Mailund [aut], Tomasz Kalinowski [aut], James Hiebert [ctb], Iñaki Ucar [aut] (ORCID: ), Thomas Lin Pedersen [ctb]", - "Maintainer": "Edzer Pebesma ", + "NeedsCompilation": "no", + "Author": "Yihui Xie [aut, cre, cph] (ORCID: ), Posit Software, PBC [cph, fnd], Christophe Dervieux [ctb] (ORCID: ), Devon Ryan [ctb] (ORCID: ), Ethan Heinzen [ctb], Fernando Cagua [ctb]", + "Maintainer": "Yihui Xie ", "Repository": "CRAN" }, "utf8": { @@ -3467,76 +2914,6 @@ "Author": "Simon Garnier [aut, cre], Noam Ross [ctb, cph], Bob Rudis [ctb, cph], Marco Sciaini [ctb, cph], Antônio Pedro Camargo [ctb, cph], Cédric Scherer [ctb, cph]", "Repository": "CRAN" }, - "vroom": { - "Package": "vroom", - "Version": "1.6.6", - "Source": "Repository", - "Title": "Read and Write Rectangular Text Data Quickly", - "Authors@R": "c( person(\"Jim\", \"Hester\", role = \"aut\", comment = c(ORCID = \"0000-0002-2739-7082\")), person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Jennifer\", \"Bryan\", , \"jenny@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-6983-2759\")), person(\"Shelby\", \"Bearrows\", role = \"ctb\"), person(\"https://github.com/mandreyel/\", role = \"cph\", comment = \"mio library\"), person(\"Jukka\", \"Jylänki\", role = \"cph\", comment = \"grisu3 implementation\"), person(\"Mikkel\", \"Jørgensen\", role = \"cph\", comment = \"grisu3 implementation\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", - "Description": "The goal of 'vroom' is to read and write data (like 'csv', 'tsv' and 'fwf') quickly. When reading it uses a quick initial indexing step, then reads the values lazily , so only the data you actually use needs to be read. The writer formats the data in parallel and writes to disk asynchronously from formatting.", - "License": "MIT + file LICENSE", - "URL": "https://vroom.r-lib.org, https://github.com/tidyverse/vroom", - "BugReports": "https://github.com/tidyverse/vroom/issues", - "Depends": [ - "R (>= 3.6)" - ], - "Imports": [ - "bit64", - "cli (>= 3.2.0)", - "crayon", - "glue", - "hms", - "lifecycle (>= 1.0.3)", - "methods", - "rlang (>= 0.4.2)", - "stats", - "tibble (>= 2.0.0)", - "tidyselect", - "tzdb (>= 0.1.1)", - "vctrs (>= 0.2.0)", - "withr" - ], - "Suggests": [ - "archive", - "bench (>= 1.1.0)", - "covr", - "curl", - "dplyr", - "forcats", - "fs", - "ggplot2", - "knitr", - "patchwork", - "prettyunits", - "purrr", - "rmarkdown", - "rstudioapi", - "scales", - "spelling", - "testthat (>= 2.1.0)", - "tidyr", - "utils", - "waldo", - "xml2" - ], - "LinkingTo": [ - "cpp11 (>= 0.2.0)", - "progress (>= 1.2.3)", - "tzdb (>= 0.1.1)" - ], - "VignetteBuilder": "knitr", - "Config/Needs/website": "nycflights13, tidyverse/tidytemplate", - "Config/testthat/edition": "3", - "Config/testthat/parallel": "false", - "Copyright": "file COPYRIGHTS", - "Encoding": "UTF-8", - "Language": "en-US", - "RoxygenNote": "7.3.3", - "NeedsCompilation": "yes", - "Author": "Jim Hester [aut] (ORCID: ), Hadley Wickham [aut] (ORCID: ), Jennifer Bryan [aut, cre] (ORCID: ), Shelby Bearrows [ctb], https://github.com/mandreyel/ [cph] (mio library), Jukka Jylänki [cph] (grisu3 implementation), Mikkel Jørgensen [cph] (grisu3 implementation), Posit Software, PBC [cph, fnd]", - "Maintainer": "Jennifer Bryan ", - "Repository": "CRAN" - }, "withr": { "Package": "withr", "Version": "3.0.2", @@ -3575,38 +2952,9 @@ "Maintainer": "Lionel Henry ", "Repository": "CRAN" }, - "wk": { - "Package": "wk", - "Version": "0.9.4", - "Source": "Repository", - "Title": "Lightweight Well-Known Geometry Parsing", - "Authors@R": "c( person(given = \"Dewey\", family = \"Dunnington\", role = c(\"aut\", \"cre\"), email = \"dewey@fishandwhistle.net\", comment = c(ORCID = \"0000-0002-9415-4582\")), person(given = \"Edzer\", family = \"Pebesma\", role = c(\"aut\"), email = \"edzer.pebesma@uni-muenster.de\", comment = c(ORCID = \"0000-0001-8049-7069\")), person(given = \"Anthony\", family = \"North\", email = \"anthony.jl.north@gmail.com\", role = c(\"ctb\")) )", - "Maintainer": "Dewey Dunnington ", - "Description": "Provides a minimal R and C++ API for parsing well-known binary and well-known text representation of geometries to and from R-native formats. Well-known binary is compact and fast to parse; well-known text is human-readable and is useful for writing tests. These formats are useful in R only if the information they contain can be accessed in R, for which high-performance functions are provided here.", - "License": "MIT + file LICENSE", - "Encoding": "UTF-8", - "RoxygenNote": "7.2.3", - "Suggests": [ - "testthat (>= 3.0.0)", - "vctrs (>= 0.3.0)", - "sf", - "tibble", - "readr" - ], - "URL": "https://paleolimbot.github.io/wk/, https://github.com/paleolimbot/wk", - "BugReports": "https://github.com/paleolimbot/wk/issues", - "Config/testthat/edition": "3", - "Depends": [ - "R (>= 2.10)" - ], - "LazyData": "true", - "NeedsCompilation": "yes", - "Author": "Dewey Dunnington [aut, cre] (), Edzer Pebesma [aut] (), Anthony North [ctb]", - "Repository": "CRAN" - }, "xfun": { "Package": "xfun", - "Version": "0.53", + "Version": "0.55", "Source": "Repository", "Type": "Package", "Title": "Supporting Functions for Packages Maintained by 'Yihui Xie'", @@ -3639,36 +2987,84 @@ "magick", "yaml", "data.table", + "qs2", "qs" ], "License": "MIT + file LICENSE", "URL": "https://github.com/yihui/xfun", "BugReports": "https://github.com/yihui/xfun/issues", "Encoding": "UTF-8", - "RoxygenNote": "7.3.2", + "RoxygenNote": "7.3.3", "VignetteBuilder": "litedown", "NeedsCompilation": "yes", "Author": "Yihui Xie [aut, cre, cph] (ORCID: , URL: https://yihui.org), Wush Wu [ctb], Daijiang Li [ctb], Xianying Tan [ctb], Salim Brüggemann [ctb] (ORCID: ), Christophe Dervieux [ctb]", "Maintainer": "Yihui Xie ", "Repository": "CRAN" }, + "xml2": { + "Package": "xml2", + "Version": "1.5.1", + "Source": "Repository", + "Title": "Parse XML", + "Authors@R": "c( person(\"Hadley\", \"Wickham\", role = \"aut\"), person(\"Jim\", \"Hester\", role = \"aut\"), person(\"Jeroen\", \"Ooms\", email = \"jeroenooms@gmail.com\", role = c(\"aut\", \"cre\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")), person(\"R Foundation\", role = \"ctb\", comment = \"Copy of R-project homepage cached as example\") )", + "Description": "Bindings to 'libxml2' for working with XML data using a simple, consistent interface based on 'XPath' expressions. Also supports XML schema validation; for 'XSLT' transformations see the 'xslt' package.", + "License": "MIT + file LICENSE", + "URL": "https://xml2.r-lib.org, https://r-lib.r-universe.dev/xml2", + "BugReports": "https://github.com/r-lib/xml2/issues", + "Depends": [ + "R (>= 3.6.0)" + ], + "Imports": [ + "cli", + "methods", + "rlang (>= 1.1.0)" + ], + "Suggests": [ + "covr", + "curl", + "httr", + "knitr", + "mockery", + "rmarkdown", + "testthat (>= 3.2.0)", + "xslt" + ], + "VignetteBuilder": "knitr", + "Config/Needs/website": "tidyverse/tidytemplate", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.3", + "SystemRequirements": "libxml2: libxml2-dev (deb), libxml2-devel (rpm)", + "Collate": "'S4.R' 'as_list.R' 'xml_parse.R' 'as_xml_document.R' 'classes.R' 'format.R' 'import-standalone-obj-type.R' 'import-standalone-purrr.R' 'import-standalone-types-check.R' 'init.R' 'nodeset_apply.R' 'paths.R' 'utils.R' 'xml2-package.R' 'xml_attr.R' 'xml_children.R' 'xml_document.R' 'xml_find.R' 'xml_missing.R' 'xml_modify.R' 'xml_name.R' 'xml_namespaces.R' 'xml_node.R' 'xml_nodeset.R' 'xml_path.R' 'xml_schema.R' 'xml_serialize.R' 'xml_structure.R' 'xml_text.R' 'xml_type.R' 'xml_url.R' 'xml_write.R' 'zzz.R'", + "Config/testthat/edition": "3", + "NeedsCompilation": "yes", + "Author": "Hadley Wickham [aut], Jim Hester [aut], Jeroen Ooms [aut, cre], Posit Software, PBC [cph, fnd], R Foundation [ctb] (Copy of R-project homepage cached as example)", + "Maintainer": "Jeroen Ooms ", + "Repository": "CRAN" + }, "yaml": { "Package": "yaml", - "Version": "2.3.10", + "Version": "2.3.12", "Source": "Repository", "Type": "Package", "Title": "Methods to Convert R Data to YAML and Back", - "Date": "2024-07-22", - "Suggests": [ - "RUnit" - ], - "Author": "Shawn P Garbett [aut], Jeremy Stephens [aut, cre], Kirill Simonov [aut], Yihui Xie [ctb], Zhuoer Dong [ctb], Hadley Wickham [ctb], Jeffrey Horner [ctb], reikoch [ctb], Will Beasley [ctb], Brendan O'Connor [ctb], Gregory R. Warnes [ctb], Michael Quinn [ctb], Zhian N. Kamvar [ctb], Charlie Gao [ctb]", - "Maintainer": "Shawn Garbett ", - "License": "BSD_3_clause + file LICENSE", + "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"cre\", comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Shawn\", \"Garbett\", , \"shawn.garbett@vumc.org\", role = \"ctb\", comment = c(ORCID = \"0000-0003-4079-5621\")), person(\"Jeremy\", \"Stephens\", role = c(\"aut\", \"ctb\")), person(\"Kirill\", \"Simonov\", role = \"aut\"), person(\"Yihui\", \"Xie\", role = \"ctb\", comment = c(ORCID = \"0000-0003-0645-5666\")), person(\"Zhuoer\", \"Dong\", role = \"ctb\"), person(\"Jeffrey\", \"Horner\", role = \"ctb\"), person(\"reikoch\", role = \"ctb\"), person(\"Will\", \"Beasley\", role = \"ctb\", comment = c(ORCID = \"0000-0002-5613-5006\")), person(\"Brendan\", \"O'Connor\", role = \"ctb\"), person(\"Michael\", \"Quinn\", role = \"ctb\"), person(\"Charlie\", \"Gao\", role = \"ctb\"), person(c(\"Gregory\", \"R.\"), \"Warnes\", role = \"ctb\"), person(c(\"Zhian\", \"N.\"), \"Kamvar\", role = \"ctb\") )", "Description": "Implements the 'libyaml' 'YAML' 1.1 parser and emitter () for R.", - "URL": "https://github.com/vubiostat/r-yaml/", - "BugReports": "https://github.com/vubiostat/r-yaml/issues", + "License": "BSD_3_clause + file LICENSE", + "URL": "https://yaml.r-lib.org, https://github.com/r-lib/yaml/", + "BugReports": "https://github.com/r-lib/yaml/issues", + "Suggests": [ + "knitr", + "rmarkdown", + "testthat (>= 3.0.0)" + ], + "Config/testthat/edition": "3", + "Config/Needs/website": "tidyverse/tidytemplate", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.3", + "VignetteBuilder": "knitr", "NeedsCompilation": "yes", + "Author": "Hadley Wickham [cre] (ORCID: ), Shawn Garbett [ctb] (ORCID: ), Jeremy Stephens [aut, ctb], Kirill Simonov [aut], Yihui Xie [ctb] (ORCID: ), Zhuoer Dong [ctb], Jeffrey Horner [ctb], reikoch [ctb], Will Beasley [ctb] (ORCID: ), Brendan O'Connor [ctb], Michael Quinn [ctb], Charlie Gao [ctb], Gregory R. Warnes [ctb], Zhian N. Kamvar [ctb]", + "Maintainer": "Hadley Wickham ", "Repository": "CRAN" } }